Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0961 ATGTTTCCGAGTGAGAACCATAGTAACGGCTACCAGCAGGTGGCTGCGGGGATGGGTCACAGTCACAGGGAGCGAGTCCGTCGCGGCACTCGCAGGTCACGTGCCTCCGCTTCCGCACACGCCCTTAGGGTTTGTGACCAACCGCAACCGCAACATCATCGACCTCCTTGCACCGACTTCGACAAGGCCTATTTCCATTCCTACTCTCACCTCGGTATCCACCAAGAGATGATCAAGGATCGTGTGCGTACCGACACTTATAGGGACGCAATCATGCAGCATCAGAGTTACATTGCTGGCAAAGTTGTGGTTGATGTTGGATGTGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAATTGATGCCAGTGACATTGCCCTGCAGGCAAATGAAGTTGTGAAAGCAAATAACTTGTctgatgttgttgttgtattgcATGGACGGGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATATGAGaGCATGCTTGGAAGTGTTATTACGGCTAGAGATCGTTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATACGGACAGATACAGTGACAGCGTTGACTTCTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGGTATCATTAGCTAAACAATGTGCATTTGAAGAACCTTCCGTGGAGACAATAACTGGTGAAAATGTTTTGACATGGCCACATGTGgttaaatatattgatagttaTTCTGTTACCACCCACGAGCTAGAATCTGTAACAACCAAGTTTAAGTTCAATTCTATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGCATGCAATAGCATCAACCAATTATCATTCGACAACTTCATTTATTGACAATCATCAGATGAATGGTAGTCAGAGAAAAAAGCGAACAAATCCAAATGAAGCACTGGTCTTGTCCACTGCACCTGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTCTATGATCCTTTAGAGCTGGAACAAGATCAACTAATTGAAGGTTCAGTGACATTGTCACAAAGCAAAGAAAATGCTCGATTTATGAACATTCACCTTGAATATACTTCTGGTGGTCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1239 0.431 MFPSENHSNGYQQVAAGMGHSHRERVRRGTRRSRASASAHALRVCDQPQPQHHRPPCTDFDKAYFHSYSHLGIHQEMIKDRVRTDTYRDAIMQHQSYIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSATLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMVSLAKQCAFEEPSVETITGENVLTWPHVVKYIDSYSVTTHELESVTTKFKFNSMMRAPLHGFAFWFDVEFNGHAIASTNYHSTTSFIDNHQMNGSQRKKRTNPNEALVLSTAPEDPPTHWQQTLIYFYDPLELEQDQLIEGSVTLSQSKENARFMNIHLEYTSGGRSYVKESVMR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0961 412 Gene3D - 205 411 - -
Ssu2g0961 412 PANTHER BNAC03G41340D PROTEIN 28 409 - -
Ssu2g0961 412 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 402 IPR029063 -
Ssu2g0961 412 MobiDBLite consensus disorder prediction 1 15 - -
Ssu2g0961 412 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 61 412 IPR025799 GO:0016274|GO:0018216
Ssu2g0961 412 Pfam Ribosomal protein L11 methyltransferase (PrmA) 99 173 - -
Ssu2g0961 412 Gene3D Vaccinia Virus protein VP39 58 203 IPR029063 -
Ssu2g0961 412 CDD AdoMet_MTases 103 202 - -
Ssu2g0961 412 MobiDBLite consensus disorder prediction 1 55 - -
Ssu2g0961 412 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 28 409 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0961 Ssu-Chr2 46793915 46807260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0961 64 379 C2H2 Transcription Factor Family AT3G12270 38.066 6.38e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0961 K11437 - gmx:100809174 739.569