Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0919 ATGGGTGGTAAGGCTCTTACATCGAGCCTTTGTCGACACTTCTCCTTCACTAAAATCAAGTTGGCCACAAATAACTTCGATGAGGTCTTGCTACTTGGCGTGGGAGGGTTCGGGAAGGTTTACAAAGGAGAAATCTATGGAGGGAAAACCAAAGAGGCAATCAAGCGTGGGAACCCGCTTTCTGAGCAAGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCTAAACTTCACCACTGGCACTTGGTTTCCCTCATTGGATACTACAAGGAGAACACTGAAATGATCCTTGTTTATCTGCTAAAGGGTTGCACTACCTCCACACTGGTGCCAAGCACACCATCATCCACCGTGACATGA 363 0.4711 MGGKALTSSLCRHFSFTKIKLATNNFDEVLLLGVGGFGKVYKGEIYGGKTKEAIKRGNPLSEQGVHEFQTEIEMLSKLHHWHLVSLIGYYKENTEMILVYLLKGCTTSTLVPSTPSSTVT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0919 120 Pfam Protein tyrosine and serine/threonine kinase 32 100 IPR001245 GO:0004672|GO:0006468
Ssu2g0919 120 ProSiteProfiles Protein kinase domain profile. 26 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0919 120 Gene3D Phosphorylase Kinase; domain 1 11 101 - -
Ssu2g0919 120 SUPERFAMILY Protein kinase-like (PK-like) 8 100 IPR011009 -
Ssu2g0919 120 PANTHER OS07G0166700 PROTEIN 5 100 IPR045272 GO:0004714|GO:0006468
Ssu2g0919 120 PANTHER - 5 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0919 Ssu-Chr2 46104616 46104978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0919 5 100 Receptor kinase-like Gene Family AT3G51550 79.167 1.58e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu2g0919 PK_Tyr_Ser-Thr 2.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0919 - - gmx:100499644 159.073