Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu2g0913 | ATGGAACTTAATGCCCCAAACATTCCCCCTTTTGAAATATCTCATTCTCGACCCCAAAGGATTCGTCCCAAAAGCGTCCAATTTGATGATACCATCCTCTTACATGATGACAATGCCAGCCTCATCTATGTTAATGATCCCATCAAGACTAATGAAAAGTATGAGTTTTCCGGGAATGAGATCCGAACCAGCAAATACACTCTTCTCACCTTCTTGCCCAAGAATCTTTTCATTCAGTTTCACCGGGTTGCTTATCTCTATTTCCTTGCCATTGCCGCTCTCAATCAGCTTCCTCCACTCGCCGTTTTCGGGCGAACCGTGTCCCTTTTCCCCCTTCTGTTTGTGCTTTGCATCACTGCTATCAAGGATGCTTATGAGGATTGGCGCAGGCACAGGtcggataaaaaagaaaacaatcgAGAGAGTCTGGTTCTTCAATCTGCTCAGTTCCACCCCATGAAATGGAAAGAAATACAGGCTGGCAATGTTGTTAAAATCTTTGCCGATGAGATGATTCCCGCTGACATGGTCTTGTTGGGGACAAGTGATCCAAGTGGGATTGCCTATATTCAGACAATGAATTTGGATGGAGAATCTAATTTGAAGACAAGGTATGCTAAGCAGGAAACAGCTTCAACGGTGTTGCCAGATGCATGTGCTGTCTCTGGAGTTATTAGATGTGAGCAACCTAATCGGAATATTTATGAGTTCACCGCCAACATGGAGTTCAATGGGCATAAGTTTCCCCTTAACCAGTCAAACATTGTGCTGCGTGGTTGCGTGCTGAAGAACACGGATTGGATAATTGGCGTGGTGGTTTATGCAGGACAGCAAACAAAAGCAATGTTGAACAGCGCAGCTTCCCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAACAGAGAAACTTTTTGGTTgtcagtttttctttttatcatgtgCGCAGTTGTGGCCCTTGGGATGGGTCTCTGGCTGGTACGCCACAAGGATCAGCTTGATACCTTGCCTTACTACAGAAAAACATACTTCAACAATGGGCCGGATAAGGGAAAGAAATACCGGTATTATGGGATACCGATGGAAACATTCTTCTCCTTTTTGAGTTCTATTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGTTGGTTCGTTTGGGTCAGTCGTACTTCATGATAGAGGACAGGGATATGTATGATGCTAACTCTGGATCAAGGTTCCAGTGTagatcattaaatattaatgaagaTTTGGGTCAAATACGCTATGTGTTTTCAGACAAGACAGGAACATTAACAGAAAACAAAATGGAGTTTCAGAGAGCTAGTGTATATGGAAAGAACTATGGGTGCTCCTTGCTTATGGCAGATAACAAGACagCAGCAGCCGATAGTGGTAAACGAAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAACTAACAGCATTGTTGCAGAAAGACTCAAATGGAGATGAAAGAATTACTGCTCATGAGTTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCCATTATTAGTAGCAGTACATTTTCCAGTTGTGGAAATGGAGAATCAAATGAAGACATAGAAAGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCTGCCTCTGCATATGGATATACTCTATGTGAGCGAACATCGGGACACATTGTTATTGACGTTAATGGTCAGAAACTCAGGTTGGATGTATTGGGCATGCATGAGTTTGATAGTGTGCGAAAGAGGATGTCTGTTGTTATCCAGTTTCCTGACAATGTTGTTAAGGTGTTGGTTAAAGGCGCTGACACTTCAATGTTTAGCATTTTAGCACATGACAACGAAGGCAACAATGGCATACGGCATGAAACTCAGAGTCATTTAAGTGAATATTCTTTGCAAGGTTTACGAACACTTGTAGTTGCCTCCAGGGATCTTTCAGATGCCGAACTTGAGGAGTGGCAAAGCATGTATGAAGATGCGAGCACTTCATTGACTGATCGAGCTGCAAAACTGCGTCAAACAGCGGCTCTTATAGAATGCAACCTAAAGCTACTTGGAGTAACTGCAATTGAGGACAAGCTACAGGAGGGTGTACCAGAAGCCATTGAGTCCCTGCGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACCGCAATTTCAATTGGTCTTTCTTGTAAACTTTTGAGTGCAGATATGCAGCAGATAATTATAAATGGCACTTCAGAGGTTGAGTGCAGAAATCTCTTGGCTGATGCTAAAGCGAAGTATGGTGTGAGATCTTCAAGTAGAGGACATCAGAATCTGAAGTGCAAAACTGATTCTAGATATGGTGGCCATGATATTCCCAATGATACAAAATCCTTGAGCATGCCCAAGTGGAATCCAGGAAAGGAAGAAGGAAGTACTGCTCCATTGGCACTCATAATTGATGGTACCAGTTTGGTTTATATTTTGGAGAAGGAACTACAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTCCTATGCTGCCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATCTGATAAAAAGACGCACAGATGATCTGACATTAGCTATAGGTGATGGGGCAAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAATTCCAGTTCTTGAAAAAATTGCTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTAATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACAGATTGGAGTAGTGTATTATACTCTGTGATATACACATCTATCCCTACTATCATTGTTGGTGTTCTGGACAAAGACTTGAGTCATAGGACACTCTTGCAGTATCCAAAATTGTATGGTGCAGGTCACCGGCACGAGGCTTACAATATGCAATTATTTTGGATAACAATGATTGACACACTATGGCAGAGCCTTGTTCTCTTCTACATTCCCCTATTCACTTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGTTTATGGACAATTTCAGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATTAACCAGTGGGAACTAATTAGTCATGTTGCTGTATGGGGATCAATAATCATTACATATGGTTGTGTCGTGGTATTGGATTCTATACCTGTCTTTCCCAATTACGGGACTATTTATCATTTGGCAAGGTCCCCTACATATTGGATGACAATTTTGCTTATAATAATTGTGGCATTGCTACCTCGCTTTTCTTGCAAAGCTGTTTATCAAATCTTTTGTCCTTCAGATATCCAGATAGCTAGAGAAGCTGAGACAATGAGAAAACAGCATGATGATGTGCAGTCAAGGCTACCAGTTTCCAATTAA | 3531 | 0.4126 | MELNAPNIPPFEISHSRPQRIRPKSVQFDDTILLHDDNASLIYVNDPIKTNEKYEFSGNEIRTSKYTLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCITAIKDAYEDWRRHRSDKKENNRESLVLQSAQFHPMKWKEIQAGNVVKIFADEMIPADMVLLGTSDPSGIAYIQTMNLDGESNLKTRYAKQETASTVLPDACAVSGVIRCEQPNRNIYEFTANMEFNGHKFPLNQSNIVLRGCVLKNTDWIIGVVVYAGQQTKAMLNSAASPSKRSKLESYMNRETFWLSVFLFIMCAVVALGMGLWLVRHKDQLDTLPYYRKTYFNNGPDKGKKYRYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVYGKNYGCSLLMADNKTAAADSGKRRWKLKSEIAVDSELTALLQKDSNGDERITAHEFFLTLAACNTVIPIISSSTFSSCGNGESNEDIESIDYQGESPDEQALVSAASAYGYTLCERTSGHIVIDVNGQKLRLDVLGMHEFDSVRKRMSVVIQFPDNVVKVLVKGADTSMFSILAHDNEGNNGIRHETQSHLSEYSLQGLRTLVVASRDLSDAELEEWQSMYEDASTSLTDRAAKLRQTAALIECNLKLLGVTAIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLSADMQQIIINGTSEVECRNLLADAKAKYGVRSSSRGHQNLKCKTDSRYGGHDIPNDTKSLSMPKWNPGKEEGSTAPLALIIDGTSLVYILEKELQSELFDLATSCRVVLCCRVAPLQKAGIVDLIKRRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVLYSVIYTSIPTIIVGVLDKDLSHRTLLQYPKLYGAGHRHEAYNMQLFWITMIDTLWQSLVLFYIPLFTYKDSTIDIWSMGSLWTISVVILVNVHLAMDINQWELISHVAVWGSIIITYGCVVVLDSIPVFPNYGTIYHLARSPTYWMTILLIIIVALLPRFSCKAVYQIFCPSDIQIAREAETMRKQHDDVQSRLPVSN | 1176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu2g0913 | 1176 | SFLD | C1.7: P-type atpase like | 413 | 933 | - | - | |
Ssu2g0913 | 1176 | SUPERFAMILY | HAD-like | 416 | 926 | IPR036412 | - | |
Ssu2g0913 | 1176 | Gene3D | - | 695 | 922 | IPR023214 | - | |
Ssu2g0913 | 1176 | Gene3D | - | 540 | 677 | IPR023299 | GO:0000166 | |
Ssu2g0913 | 1176 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 37 | 1171 | - | - | |
Ssu2g0913 | 1176 | Pfam | Phospholipid-translocating ATPase N-terminal | 42 | 107 | IPR032631 | - | |
Ssu2g0913 | 1176 | Gene3D | - | 412 | 425 | - | - | |
Ssu2g0913 | 1176 | SUPERFAMILY | Calcium ATPase, transduction domain A | 140 | 281 | IPR008250 | - | |
Ssu2g0913 | 1176 | Gene3D | - | 439 | 475 | IPR023299 | GO:0000166 | |
Ssu2g0913 | 1176 | Gene3D | - | 115 | 285 | - | - | |
Ssu2g0913 | 1176 | CDD | P-type_ATPase_APLT_Dnf-like | 58 | 1042 | - | - | |
Ssu2g0913 | 1176 | Pfam | E1-E2 ATPase | 140 | 387 | - | - | |
Ssu2g0913 | 1176 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 431 | 437 | IPR018303 | - | |
Ssu2g0913 | 1176 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 56 | 1148 | IPR023298 | - | |
Ssu2g0913 | 1176 | PRINTS | P-type cation-transporting ATPase superfamily signature | 882 | 901 | - | - | |
Ssu2g0913 | 1176 | PRINTS | P-type cation-transporting ATPase superfamily signature | 429 | 443 | - | - | |
Ssu2g0913 | 1176 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 56 | 1157 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Ssu2g0913 | 1176 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 692 | 746 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Ssu2g0913 | 1176 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 852 | 968 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Ssu2g0913 | 1176 | SFLD | p-type atpase | 413 | 933 | IPR044492 | - | |
Ssu2g0913 | 1176 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 435 | 711 | IPR023299 | GO:0000166 | |
Ssu2g0913 | 1176 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 37 | 1171 | - | - | |
Ssu2g0913 | 1176 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 910 | 1150 | IPR032630 | - | |
Ssu2g0913 | 1176 | Pfam | Cation transport ATPase (P-type) | 523 | 619 | - | - | |
Ssu2g0913 | 1176 | Gene3D | - | 426 | 438 | IPR023214 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu2g0913 | Ssu-Chr2 | 46036334 | 46041402 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu2g0913 | 19 | 1161 | Primary Pumps ATPases | AT5G04930 | 55.882 | 0.0 | 1320 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu2g0913 | K14802 | - | gmx:100788740 | 2163.65 |