Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0855 ATGATACAGCATTCTGAGAAGGCATTGAGGAGGACACTCTTTCTTTCTGTCTTGGTCTCAGCTGGTGTTTTTCCAACTCTGTCTTCTTACGGGAAGACAAAGAGTAGGAATCCATATGATGAGAACCGCTTGCTGCAACAAAATCGGCGGATACAGAAAGAAAACAATGCGCCGGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTCAAGTTAAAGTAGTATCATCAGATAACTATGTAAAGAGTGATTCAGGGCTCATATACCGAGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGcagATCACTTTTCACTATGTTGGCTATAACGAATCTGGCCGTCGTATTGACAGCACTTATTTGCGGGGTTCTCCTGCCAAAATCCGCATGGGTAACAAGGCTTTAGTTCCagGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATTATTCCCCCTGAACTTGGACCACCAGTAGGACCCTCGACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTTGAGCTATTAAGCATACAAAACTGTGAAAGAAGGACCATAGCCTTTTACTCGGATGTCATATGCAATTGA 618 0.4191 MIQHSEKALRRTLFLSVLVSAGVFPTLSSYGKTKSRNPYDENRLLQQNRRIQKENNAPEDFPNFIREGFQVKVVSSDNYVKSDSGLIYRDFVVGQGDCPKDGQQITFHYVGYNESGRRIDSTYLRGSPAKIRMGNKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIAFYSDVICN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0855 205 SUPERFAMILY FKBP-like 47 189 - -
Ssu2g0855 205 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 102 189 IPR001179 GO:0003755
Ssu2g0855 205 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 3 205 IPR044239 -
Ssu2g0855 205 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 99 185 IPR001179 GO:0003755
Ssu2g0855 205 Gene3D - 46 197 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0855 Ssu-Chr2 43899078 43902387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0855 95 191 Calmodulin-binding Proteins AT5G48570 32.323 8.10e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0855 - - gmx:100305486 404.06