Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0846 ATGAGCCCTCATGCTTTAAACACCAATGTGAATGCCCTTGATCACCTTGAGCTCCCTGTAACGACACTGTTTCAGGATGCTTCGGCATCAACGCCGTCCATGGCGGCGTTCTGCCAGAGCTCCAGCTTCCGGGACATTTTCTTGGCGGAGAACTGGGCGGAGCTGCCGTTGAAGGAGGACGACGCTGACGACATGGTAATCTACGGCGCTTTACGTGAGGCCGCCACCACCGGATGGTTCCCCGCCAATGGCAATGAGAAGTGTGATGATAATTTGTGA 279 0.5484 MSPHALNTNVNALDHLELPVTTLFQDASASTPSMAAFCQSSSFRDIFLAENWAELPLKEDDADDMVIYGALREAATTGWFPANGNEKCDDNL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0846 92 PANTHER DNA-BINDING DOMAIN 33 85 IPR044808 GO:0003700|GO:0009873
Ssu2g0846 92 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 33 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0846 Ssu-Chr2 43612429 43613268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0846 37 82 AP2-EREBP Transcription Factor Family AT2G44840 43.478 2.67e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0846 K09286 - gmx:100793366 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0846 2 43612429 43613268 Ssu2g0846 2 43612429 43613268 ECH