Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0792 atgatttatgtttttgtgCACGTGACCAGACCAAGAGAACCAAGAAGGCCGGTATTGTTGGAAAATACGGTACGTGGCACCCGATATGGGGCTAGTCTAAGGAAGCAAATTAAAAAGATGGAAGTTAGTCAGCACAGTAAATTCTTCTGTGAGTTCTGTGGAAAGTATGCTGTTAAGAGGAAGGCCGTGGGTATTTGGGGCTGCAAAGATTGTGGAAAAGTGAAAGCTGGAGGTGCTTACACATTGAATACTGCCAGTGCTGTGACTGTCCGAAGCACCATTCGGAGGCTGAGAGAGCAGACCGAGGGTTGA 312 0.4519 MIYVFVHVTRPREPRRPVLLENTVRGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0792 103 Gene3D - 23 103 IPR011331 GO:0003735|GO:0005840|GO:0006412
Ssu2g0792 103 Pfam Ribosomal L37ae protein family 26 99 IPR002674 GO:0003735|GO:0005840|GO:0006412
Ssu2g0792 103 SUPERFAMILY Zn-binding ribosomal proteins 26 93 IPR011332 GO:0006412
Ssu2g0792 103 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 13 102 - -
Ssu2g0792 103 PANTHER 60S RIBOSOMAL PROTEIN L37A 13 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0792 Ssu-Chr2 41357784 41359035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0792 26 103 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 93.590 5.69e-51 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0792 K02921 - gmx:100798254 162.925