Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0791 ATGCATCAAAAGAAATCCGAAGTCCAGATCGGAAAAGAAAGCACCGGCGTCTCTTCCGATTTCAACCCCCTCCACCACCATCCAAACCCGAACCTAAccccaaacccaaaccaaaacGTCTCTCACCAATCACTAACCTCCGCACCTTACAAAAGACCCTTACTCACCCAATCCCTCTCCAAATCCCCAACCCTCTACAaattaccaccaccaccgcccCCGCCCCCTAAAAGACGCCACGTCAGCGCGCTGACGTGGCTCTCCGCGGTCTCGCTCCGCCGCCTCCGCCTCGTCCCCTTCCTCTCCTTACCATTCTTCTACTTCCTCGTCTCCCGCCCGACGAATTCCTTCCTCCTCGACTTCCTCTCCGCGTTCCTCTTCTCCGCCGCGCTCCTCTTCTCGCTCAACCTCGCCCTCCCGCGCATCCCCTCCCTCCGCCTCTTGCTCAGCCTGAAGCCCGCGGCCCGGCCCGCGCTCAGGCTTCCCGTGTTCTGGACCGTGGGGGCCCGGTCCAACGGGAGCCCCCCCCGGCCCGCGGGCGCGTATTTCTCCGTGGCGGCGTACGCGAACGGGGACGTGTACGAGGGGGAGTTCAAGGGAGCGAAGTGTTGCGGGAGTGGGGTGTACTGCTACAGCATGAGTGGGAGGTACGAGGGGGACTGGGTGGACGGGAAGTACGACGGGTTCGGCGTGGAGACGTGGGCCCGGGGGAGCCGGTACCGCGGGCAGTACCGGCAGGGGCTCCGGCACGGGTTCGGGGTGTACCGCTTCTACACTGGGGACGTTTACGCCGGGGAGTGGGCCAGTGGGCAGAGTCATGGGTGTGGCGTGCACACGTGCGAGGATGGGAGCAGGTACGTGGGGGAGTTCAAGTGGGGCGTTAAGCATGGCCTTGGACACTACCATTTTAGAAATGGGGATACATATGCTGGTGAATACTTTGCGGATAAGATGCATGGGTTTGGGGTATATAGCTTTGCAAATGGCCATTGTTATGAAGGATCTTGGCATGAAGGCAAAAGGCAAGGTCTTGGAATGTATACATTTAGAACTGGAGAAACCCAGTCTGGTCACTGGCAAAATGGAGTCCTTGACATTCCAAGCACACAGAGTGCCACGTATCCTGTTTCTCCTGTTGGTGTCAATCATTCCAGAGTACTTAATGTGGTGCAGGAAGCGAGAAGAGCAGCTGAGAAGGCCTATGATGTGGCCAAGGTAGATGAAAGGGTGAATAGAGCAGTAGCAGCCGCAAACAGAGCAGCCAATGCAGCTAGAGTAGCAGCTGTCAAGGCTGTGCAAAACCAAATGCATCATAATGTTAACAGCAACAGCATCCCAATTCCCGTTGTGTGA 1353 0.5602 MHQKKSEVQIGKESTGVSSDFNPLHHHPNPNLTPNPNQNVSHQSLTSAPYKRPLLTQSLSKSPTLYKLPPPPPPPPKRRHVSALTWLSAVSLRRLRLVPFLSLPFFYFLVSRPTNSFLLDFLSAFLFSAALLFSLNLALPRIPSLRLLLSLKPAARPALRLPVFWTVGARSNGSPPRPAGAYFSVAAYANGDVYEGEFKGAKCCGSGVYCYSMSGRYEGDWVDGKYDGFGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWASGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGVYSFANGHCYEGSWHEGKRQGLGMYTFRTGETQSGHWQNGVLDIPSTQSATYPVSPVGVNHSRVLNVVQEARRAAEKAYDVAKVDERVNRAVAAANRAANAARVAAVKAVQNQMHHNVNSNSIPIPVV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0791 450 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 104 440 - -
Ssu2g0791 450 MobiDBLite consensus disorder prediction 1 46 - -
Ssu2g0791 450 SMART morn 215 236 IPR003409 -
Ssu2g0791 450 SMART morn 284 305 IPR003409 -
Ssu2g0791 450 SMART morn 261 282 IPR003409 -
Ssu2g0791 450 SMART morn 238 259 IPR003409 -
Ssu2g0791 450 SMART morn 330 351 IPR003409 -
Ssu2g0791 450 SMART morn 192 213 IPR003409 -
Ssu2g0791 450 SMART morn 307 328 IPR003409 -
Ssu2g0791 450 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 188 301 - -
Ssu2g0791 450 PANTHER - 104 440 - -
Ssu2g0791 450 Pfam MORN repeat 194 213 IPR003409 -
Ssu2g0791 450 Pfam MORN repeat 286 308 IPR003409 -
Ssu2g0791 450 Pfam MORN repeat 217 239 IPR003409 -
Ssu2g0791 450 Pfam MORN repeat 332 353 IPR003409 -
Ssu2g0791 450 Pfam MORN repeat 263 285 IPR003409 -
Ssu2g0791 450 Pfam MORN repeat 240 262 IPR003409 -
Ssu2g0791 450 Pfam MORN repeat 309 330 IPR003409 -
Ssu2g0791 450 Gene3D - 182 223 - -
Ssu2g0791 450 Gene3D - 315 379 - -
Ssu2g0791 450 Gene3D - 269 314 - -
Ssu2g0791 450 Gene3D - 224 268 - -
Ssu2g0791 450 MobiDBLite consensus disorder prediction 10 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0791 Ssu-Chr2 41336324 41341873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0791 187 365 Acyl Lipid Metabolism Gene Families AT1G60890 37.989 3.14e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0791 - - gmx:100784010 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0791 2 41336324 41341873 Ssu3g1533 3 40751571 40757187 PCT