Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0789 ATGGAGATGAACACAGTGCAAGTTGTGTTGGGAGCAGTTTTGGTGGTGTTGATGCATGTCTTCAATGTCTTGGTGTTGAGGCCAAGATCACTGAGAGCAAAGCTTCATAGGCAGGGGATTCAAGGGCCTTCACCTCACTTCTACTTTGGCAACATCCCAGAAATGAAGACCCTTTTGCTTCAAGTTCAGTCAGCACCAACCACTCAAGTCAAAGACAAAGATGAAGATGTTTCTCTTTCTCATGCATGGCCTTTTACTCTCTTCCCTCATATTCAAAAGTGGATCAACCAATATGGTCCCATATACTTGTTTTCTTCTGGAACTATACAGTGGCTAATGGTCTCAGATATAGAGATGGTGAAGGAAGTCATCATGTACACCTCTTTGAATCTGGGGAAGCCTTCTTATCTGTCCAAAGACATGGGGCCACTCTTGGGCCAAGGTATATTGTCATCAAGTGGGCCTATTTGGGCTCATCAGAGGAAGATAATTGCCCCTGAACTATACCTTGATAAGGTGAAGACAATGGTTAATCTGATAGTTGACTCAACAAATATAACACTAAGGTCTTGGGAAACTAGACTTGAAAGTGAGGGAGCAGTTTCAGAGATTAAAATTGATGAAGATCTGCGAAGTTTGTCAGCTGACATAATTGGCAGAGCTTGTTTTGGGAGCAATTACattgaaggaaaagaaatattctCAAAGCTTAGAGATCTTCAAAAGCTCCTGTCCAAGATATATGTTGGAATTCCAGGCTTTCGATACTTGCCAAACAAAAGAAACAGACAGATGTGGAGATTGGAGAAGGAGATAAACTCAAAGATATCAAAGCTCATAAAACAACGCCAGGAGGAAACTCATGAGAAGGACCTTTTACAAATGATACTTGAGGGTGCAAAGAATTGCGAGGGTAGTGATGGTCTCCTATCAAATTCCGTCTCACGTGACAGGTTTATGATAGATAACtgcaaaaatatattctttgcTGGACATGAGACTACGGCAATTACAGCATCATGGTGCTTAATGCTGTTAGCTGCGCACCAAGATTGGCAAAACCGTGCCCGTGCTGAGGTGCTTGAAGTTTGTGGAAAAGGCGCTCCAGATTCAAGTATGCTTAGAAGCCTTAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGCTTTATTCACCAGCAGCATTTGTTGTTAGAACAGCTTACCAAGATGTTAATTTAAAAGGTATCCTAATTCCAAAAGGAATGAATATTCAGATTCCAATCCCAGTTCTGCAGCAAGACCCTCAACTCTGGGGTCCTGACGCTCACAAGTTCAATCCAGAAAGATTTGCAAATGGGGTGCTTGGAGCTTGCAAGGTTCCACAAGCTTATATACCATTTGGAGTAGGGGCACGTGTCTGTGTTGGACAGCACTTAGCCATGACAGAACTGAAGGTGATTTTGTCTCTCATTTTGTTGAAGTTTCAGTTCTCTCTCTCATCGAGTTACTGCCACTCACCTGCCTTCCATTTGGTTATCGAACCTGGCCAGGGAGTTGTTCTTAAGATGACAAGAATTTGA 1563 0.4159 MEMNTVQVVLGAVLVVLMHVFNVLVLRPRSLRAKLHRQGIQGPSPHFYFGNIPEMKTLLLQVQSAPTTQVKDKDEDVSLSHAWPFTLFPHIQKWINQYGPIYLFSSGTIQWLMVSDIEMVKEVIMYTSLNLGKPSYLSKDMGPLLGQGILSSSGPIWAHQRKIIAPELYLDKVKTMVNLIVDSTNITLRSWETRLESEGAVSEIKIDEDLRSLSADIIGRACFGSNYIEGKEIFSKLRDLQKLLSKIYVGIPGFRYLPNKRNRQMWRLEKEINSKISKLIKQRQEETHEKDLLQMILEGAKNCEGSDGLLSNSVSRDRFMIDNCKNIFFAGHETTAITASWCLMLLAAHQDWQNRARAEVLEVCGKGAPDSSMLRSLKTLTMVIQETLRLYSPAAFVVRTAYQDVNLKGILIPKGMNIQIPIPVLQQDPQLWGPDAHKFNPERFANGVLGACKVPQAYIPFGVGARVCVGQHLAMTELKVILSLILLKFQFSLSSSYCHSPAFHLVIEPGQGVVLKMTRI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0789 520 Pfam Cytochrome P450 92 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 515 - -
Ssu2g0789 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 515 - -
Ssu2g0789 520 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0789 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Ssu2g0789 520 SUPERFAMILY Cytochrome P450 84 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0789 Ssu-Chr2 41289253 41292603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0789 119 517 Cytochrome P450 AT5G24900 47.317 1.16e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0789 K24544 - gmx:100780335 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0789 2 41289253 41292603 Ssu2g0789 2 41289253 41292603 ECH