Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0785 ATGACTCCAAGACTAGGTAGTTTTGCTCTGGCTGAGTTTTTGTCAAGGAATGAGCATGGTCATCATGTAATCACCACGAGGAACAAGTCGGTTCGTGGGATTTTCGGCTACATGTCGCCGGAATATGTTGAATCCGGCGAGGCAACCACGGCTGCTGATGTTTATAGTTTTGGTGTGGTGGTACTTGAGGTTGTAAGTGGACATATGGCTGTGGATTTTAGGCAACCTGAGGTGCTGTTGGTAAAGAAGGTTCatgaatttgagatgagaaaAAGACCACTTGAGGCATTAGCAGATATAAGACTAAATGGAGAGTACAATTACAAGGAACTAATGAGATTGGTAAGGTTAGGAGTTGCATGCACCCGTTCTGACCCAAAATTAAGACCAAACACTAGACAGATAGTAAGCATCCTTGATGGCAATGACAAACTAATCATGGGGGAGAACATGGAGAGCAGGGAAGATTGGACAGAAAGAAATGCTTGCTCTTTGTCATTGGTTAAGAGAATCCAAGCTCTAGGAATACAATGA 534 0.4213 MTPRLGSFALAEFLSRNEHGHHVITTRNKSVRGIFGYMSPEYVESGEATTAADVYSFGVVVLEVVSGHMAVDFRQPEVLLVKKVHEFEMRKRPLEALADIRLNGEYNYKELMRLVRLGVACTRSDPKLRPNTRQIVSILDGNDKLIMGENMESREDWTERNACSLSLVKRIQALGIQ 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0785 177 Pfam Protein kinase domain 4 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0785 177 SUPERFAMILY Protein kinase-like (PK-like) 3 140 IPR011009 -
Ssu2g0785 177 PANTHER RECEPTOR LIKE PROTEIN KINASE S.2 1 176 - -
Ssu2g0785 177 Gene3D Transferase(Phosphotransferase) domain 1 1 163 - -
Ssu2g0785 177 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0785 177 PANTHER - 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0785 Ssu-Chr2 41226515 41227048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0785 4 145 Receptor kinase-like Gene Family AT4G02420 38.621 1.36e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu2g0785 Pkinase 7.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0785 - - gmx:100818547 325.479