Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0776 ATGGGCTTCAAAAACAACAAATCCAATGTTACTGCTGTTGGTCACGACTTTTCTGAGATCTCTGATTGCTTAGATAGACCTACCAAGTCATTTCCCGAGGTTGAAGCAAGAATCTCAGCTAAAGATGTACTTATTAGAGTTATCTGTAACAAACGAAAGGACATTGTAACGAAGCTACTGTCTATACTTGCAGCTCATAATCTCTCCATTGTGGACTGTGAATTCAGCATAACAATGGATGACCTAGTGAAAATTTTGAACAAGGATTTGCTGAAGTGCTGTAACTTGCAACAATAA 297 0.3805 MGFKNNKSNVTAVGHDFSEISDCLDRPTKSFPEVEARISAKDVLIRVICNKRKDIVTKLLSILAAHNLSIVDCEFSITMDDLVKILNKDLLKCCNLQQ 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0776 98 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 14 71 - -
Ssu2g0776 98 PANTHER BHLH TRANSCRIPTION FACTOR 14 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0776 Ssu-Chr2 40997483 40997999 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0776 31 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 39.623 2.42e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0776 - - ccaj:109790958 92.8189