LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu2g0772	ATGGCTAAAGAAGAACTCAACCAAATATACCTGTTCTTGCTGTGGTGGATGCGCATCATCGTCTTCGCTGGATCACTAATAGTCCTATTTGGGTGCCTCATCTGCGTCACAGGAGTACTAATACTGGACTTTCAGGATTTCTCGAACAAGCACGAACTATATGATATGACGGTCGTGACCGATGCTTCCATCACGCAATTTGACTACGTCGACAACACTCTCCATTACGACCTCGCCCTCAACGTTACGGTCTCCAACATCGTCTACGGCTATGACTACATTGAAGCAGGTGCATCGTATCAAGATGCCATGCTCGGTTTCTCAATCCTGAAACCGTTCAACGGAAGCATCAACGAGCTGAACGCGGTTTTCAATGGTCACCATGATGGGTTGTCCCTCGGCACCAAGGAAATATCAGAGATGAATAAGGAGAACTTATCTGGGGTTTTCCGCATCATTGTGAAGTTGTGCCTCAGGCATAGGTACTACACTTACCACCTCAACCCTATGGTTCGTTGTGACTTGCATGTTCCGCTCAAATCACACAAAGAGGTCCATGGGTTTCATGCAACCCAGTGTCATTTGCTTTCTACTCGTGCCATTTGTTCTATTCTATAG	618	0.4644	MAKEELNQIYLFLLWWMRIIVFAGSLIVLFGCLICVTGVLILDFQDFSNKHELYDMTVVTDASITQFDYVDNTLHYDLALNVTVSNIVYGYDYIEAGASYQDAMLGFSILKPFNGSINELNAVFNGHHDGLSLGTKEISEMNKENLSGVFRIIVKLCLRHRYYTYHLNPMVRCDLHVPLKSHKEVHGFHATQCHLLSTRAICSIL	205

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu2g0772	205	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN	58	195	-	-
	Ssu2g0772	205	PANTHER	OS05G0367900 PROTEIN	58	195	IPR044839	GO:0098542
	Ssu2g0772	205	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	32	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu2g0772	Ssu-Chr2	40837192	40837809	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ssu2g0772	59	179	SNARE and Associated Proteins	AT1G32270	36.567	1.38e-10	57.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu2g0772	-		-	ming:122058374	102.449

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