Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0772 ATGGCTAAAGAAGAACTCAACCAAATATACCTGTTCTTGCTGTGGTGGATGCGCATCATCGTCTTCGCTGGATCACTAATAGTCCTATTTGGGTGCCTCATCTGCGTCACAGGAGTACTAATACTGGACTTTCAGGATTTCTCGAACAAGCACGAACTATATGATATGACGGTCGTGACCGATGCTTCCATCACGCAATTTGACTACGTCGACAACACTCTCCATTACGACCTCGCCCTCAACGTTACGGTCTCCAACATCGTCTACGGCTATGACTACATTGAAGCAGGTGCATCGTATCAAGATGCCATGCTCGGTTTCTCAATCCTGAAACCGTTCAACGGAAGCATCAACGAGCTGAACGCGGTTTTCAATGGTCACCATGATGGGTTGTCCCTCGGCACCAAGGAAATATCAGAGATGAATAAGGAGAACTTATCTGGGGTTTTCCGCATCATTGTGAAGTTGTGCCTCAGGCATAGGTACTACACTTACCACCTCAACCCTATGGTTCGTTGTGACTTGCATGTTCCGCTCAAATCACACAAAGAGGTCCATGGGTTTCATGCAACCCAGTGTCATTTGCTTTCTACTCGTGCCATTTGTTCTATTCTATAG 618 0.4644 MAKEELNQIYLFLLWWMRIIVFAGSLIVLFGCLICVTGVLILDFQDFSNKHELYDMTVVTDASITQFDYVDNTLHYDLALNVTVSNIVYGYDYIEAGASYQDAMLGFSILKPFNGSINELNAVFNGHHDGLSLGTKEISEMNKENLSGVFRIIVKLCLRHRYYTYHLNPMVRCDLHVPLKSHKEVHGFHATQCHLLSTRAICSIL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0772 205 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 58 195 - -
Ssu2g0772 205 PANTHER OS05G0367900 PROTEIN 58 195 IPR044839 GO:0098542
Ssu2g0772 205 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0772 Ssu-Chr2 40837192 40837809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0772 59 179 SNARE and Associated Proteins AT1G32270 36.567 1.38e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0772 - - ming:122058374 102.449