Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0771 ATGACTCAATGTCCCAAAGTAAGAATCAAGAGGTTGCTCGTAATGATCATCATCGTCATAGTGGGAACAACTATTTTGGctattttcttcctttggtACCTCCACAATTATAGTACCGTCAAGTTATTTGTGATGAATGCTACCCTCACCCAATtcaattatactaataatatcttTTACTACAACCTCACCCTCAATATCATGGTCTCAAGCAATATTTACTACAACTACATAAATGCAAGTGTGTGGTACCAAAATGTCACGTTTGGTTCCCAAACTGTGAAAACGTTAAACGAGAGCTTAAGCGGGTTGAACATGGACTTTAAAGGTCAGCATGTGATGGCCCTCAACACCAACCAAATTTTAGAGTTgaataaagagaagaaagttGGGATTTACCACGTCAATGTGAAGTTGTGCCCCAGGCTTAGGTATGACACTAACAAGCTCAAGCCTATGATTTGTTGTGACTTGCAGGTTCCTCTGAAATCACACAAAGAAATCCCACAGGCCCATGGATTTCATGCAACTCAATGTGATTCATGTTATGAACATGATGACATTTGTTCTCTAAagcagaataattttttattacttagctga 603 0.3466 MTQCPKVRIKRLLVMIIIVIVGTTILAIFFLWYLHNYSTVKLFVMNATLTQFNYTNNIFYYNLTLNIMVSSNIYYNYINASVWYQNVTFGSQTVKTLNESLSGLNMDFKGQHVMALNTNQILELNKEKKVGIYHVNVKLCPRLRYDTNKLKPMICCDLQVPLKSHKEIPQAHGFHATQCDSCYEHDDICSLKQNNFLLLS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0771 200 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 13 181 - -
Ssu2g0771 200 PANTHER OS05G0367900 PROTEIN 13 181 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0771 Ssu-Chr2 40826116 40826718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0771 40 162 SNARE and Associated Proteins AT1G32270 29.927 2.64e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0771 - - gmx:100793187 110.923