Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0769 ATGAAACAACTTCAAGAGAGAGTAAAAGAGCTAGAGAATCAGAACAAGAGGAAAACAGCAGATTCTAGAATATTCATCAAGAAATCCCGAGTCTGCTCAAGAAAGGAATCCATGTCATGTGAAACCAACTCTTATGGTGGCTATAGATCCACGCCACCTCTACCTCAGGTTGAAGCTAGAGTCTTGGAAAAGGAAGTTCTCATTGGAATCCACTGCGAGAAACAAAAGGATATTGTGCTCAAAATTATGGCCTTGCTTCAAAATCGCCATCTCTCTCTTGCTAGTAGTAGTGTATTGCCATTTGGGACTTCCACTCTAAAAGTTACAATCATTGCCCAGATGGGCGACAAATACTGCATGACGGTGAATGATCTAGTAAAAAGCCTGAGGCAAGATCTCTTGAAGTCACATGACATTCAAGAGTCATATTCCTAA 435 0.4092 MKQLQERVKELENQNKRKTADSRIFIKKSRVCSRKESMSCETNSYGGYRSTPPLPQVEARVLEKEVLIGIHCEKQKDIVLKIMALLQNRHLSLASSSVLPFGTSTLKVTIIAQMGDKYCMTVNDLVKSLRQDLLKSHDIQESYS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0769 144 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 140 - -
Ssu2g0769 144 PANTHER BHLH TRANSCRIPTION FACTOR 1 140 - -
Ssu2g0769 144 Coils Coil 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0769 Ssu-Chr2 40798354 40799483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0769 1 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.857 2.94e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0769 - - gmx:100786209 235.728