Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0753 ATGGCATCGACATTTCTCACCATACCAACTCCCTTTCTACACAAAAACAATGCCATCTCTTTCTCTAACAAGAAACCCTCATTTTTGCAGAGGAGCTCTGTGAAGATCAATGCAATTTCCAAAAAATGGGAACCCACCaagGTTGTGCCTCAGGCTGATAGAGTTCTTATTCGTTTGGAGGAGCTATCAGATAAAACAGTTGGTGGTATTTTGCTGCCCAAGTCAGCTGTGAAATTTGAGCGTTATCTCGTGGGTGAAatCCTAACTGTTGGTGCTGAGGCTGGAGAACTAAAGTCTGGAACAAAGGTACTATTCACTGACATAAATGCTTATGAGGTGGATTTGGGGACTGATGCAAAGCACTGCTTCTGTAAAGCAAGTGACTTATTGGCCGTGGTTGAGTAG 405 0.4296 MASTFLTIPTPFLHKNNAISFSNKKPSFLQRSSVKINAISKKWEPTKVVPQADRVLIRLEELSDKTVGGILLPKSAVKFERYLVGEILTVGAEAGELKSGTKVLFTDINAYEVDLGTDAKHCFCKASDLLAVVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0753 134 PANTHER 10 KDA CHAPERONIN 1, CHLOROPLASTIC-RELATED 16 133 - -
Ssu2g0753 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Ssu2g0753 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu2g0753 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu2g0753 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Ssu2g0753 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Ssu2g0753 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 16 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0753 15 134 Calmodulin-binding Proteins AT5G20720 28.788 8.43e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0753 K04078 - gmx:100306026 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0753 2 40391459 40395987 Ssu2g0753 2 40391459 40395987 ECH