Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0729 ATGGTTGGGGAGTCAGGAAAGTGGGTGATGCTGCTAGCATCAATATGGATACAGGCATTCACAGGGACAAACTTTGACTTCTCATCTTATTCATCTGAGCTCAAATCTGTTCTTAACATAACTCAGCTTCAGCTCAATTATCTAGCAGTGGCATCAGACATGGGAAAGGCCTTTGGGTGGTGCTCTGGGGTCTCACTCATGTATTTCCCTTTGTGGGTGGTTATGTTCATGGCTGCTTTCTTGGGACTTGTTGGGTATGGCTTCCAATGGCTTGTCATTCAAAGATTCATCACTTTGCCTTATATTGCGGTCTTTTTTCTATGCCTGATTGCTGGCTGCAGCATCTGCTGGTTCAACACCATCTGCTATGTCTTATGCATCAGACATTTTCTAGCAAACCGCTCCCTTGCATTATCATTGAGTATTAGTTTCAATGGTGTGAGTGCAGCTTTGTACACTCTCATTGCCAATGCAATAAACTCAAATGATGACACTCTCTATCTATTACTCAATGCCATTGTTCCTGTACTAATTTCTGGACTAGTACTCATCCCAGTTCTTCATCAACCACAGCCTCAACCACATTCTGTTGACACCATTCAGCGCGATTCATCGGTTTTTCTTTGCCTCAACATCCTTGCCGTTGTCACAGGCCTCTACCTCCTCTCCTTATACTCCTTCTCTTCTACTGTGACCATTGCTCGCATTATCCTTGGAGGTGCCATTTTTCTCCTTGTACTGCTTTTATTCTTGCCTGGCATTGTGTGTTCTAGAGAATGGTCTTGCCTCACTTTCGCCACAAGATTTTCCTTATACAACACAAGATTCACTCACGCCGACCCCAATGACCGGGAGCTCTACAAAGAACTCATTGGTATCGAGGACGGCGCGAGGAATCGAAGTGGACAAAGCACAAGAGAGAAGAAATGTTGTCTTGTGAGTGTGTTGGAGAGAGAGCAGCTTACAGTGCTAGGGGAAGAGCATTCAACTAAGTTGCTAGTGCGTAGGTGGGACTTCTGGCTGTACTACATAGCATATTTCTGTGGAGGAACAATTGGGTTGGTTTACAGCAACAACTTGGGACAAATTGCCCAATCACTTGGACAATATTCTCAGACTTCTTCTCTTGTCACACTCTACTCCACATGTTCCTTCTTTGGTCGCCTTCTTGCAGCCGCACCTGACTTCTTAAGCAGTAAGATAAACTTTGCAAGAACTGGATGGTTTGCAGTAGCCCTGGTGCCAACACCAATTGCATTCATTTTGCTGGCCATATCTGGCAGTGAACCAGCGTTACACATAGGCACTGGCTTGATTGGGCTGAGTTCAGGCTTTGTGTTTGCTGCAGCAGTATCTATTACCTCAGAGCTTTTTGGCCCAAACAGTGTTGGGGTGAACCACAACATCCTCATCACTAACATTCCTTTAGGTTCATGTCTCTATGGCCTTCTTGCAGCCTTGGTTTATGATTCCAATGCAATGAGCTCAAGTCACATGAATTGGCTGCGCGAAATGACCATGTGCATGGGGAGGAAGTGCTACCTACAGACTTTTATATGGTGGAGTTGCATTTCAATGGTAGGATTGGTTTCAAGCTTCTTGCTTTTCATAAGGACTAAGCAAGCTTAtgacaattttgaaataaataataatggaaaCAGAACAGAGACTATGTAA 1677 0.4395 MVGESGKWVMLLASIWIQAFTGTNFDFSSYSSELKSVLNITQLQLNYLAVASDMGKAFGWCSGVSLMYFPLWVVMFMAAFLGLVGYGFQWLVIQRFITLPYIAVFFLCLIAGCSICWFNTICYVLCIRHFLANRSLALSLSISFNGVSAALYTLIANAINSNDDTLYLLLNAIVPVLISGLVLIPVLHQPQPQPHSVDTIQRDSSVFLCLNILAVVTGLYLLSLYSFSSTVTIARIILGGAIFLLVLLLFLPGIVCSREWSCLTFATRFSLYNTRFTHADPNDRELYKELIGIEDGARNRSGQSTREKKCCLVSVLEREQLTVLGEEHSTKLLVRRWDFWLYYIAYFCGGTIGLVYSNNLGQIAQSLGQYSQTSSLVTLYSTCSFFGRLLAAAPDFLSSKINFARTGWFAVALVPTPIAFILLAISGSEPALHIGTGLIGLSSGFVFAAAVSITSELFGPNSVGVNHNILITNIPLGSCLYGLLAALVYDSNAMSSSHMNWLREMTMCMGRKCYLQTFIWWSCISMVGLVSSFLLFIRTKQAYDNFEINNNGNRTETM 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0729 558 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 551 - -
Ssu2g0729 558 Pfam Nodulin-like 7 255 IPR010658 -
Ssu2g0729 558 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 551 - -
Ssu2g0729 558 Gene3D MFS general substrate transporter like domains 288 543 IPR036259 -
Ssu2g0729 558 SUPERFAMILY MFS general substrate transporter 8 541 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0729 Ssu-Chr2 39480616 39487779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0729 1 550 Nodulin-like Gene Family AT1G31470 55.435 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0729 - - gmx:100804951 940.643