Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0698 ATGCTTCTGCATAGCTGGATTTTCAGTTCtcatattgttattttcttgcTGCTGATTAGTTGTGGCATGACCTATGGGACTGACACTGATATCTTCTGCCTGAAAAGTATCAAAGATTCCCTTGAAGACCCCTATAATTATTTGAAGTTTTCTTGGGATTTCAACAACAAAACGGAAGGGTTCATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAAACTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTGACATTCAAAATTGCTCGAGTTTAACTGGATTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGTAGATATATCTACTCTTATACCATATGCGACGTCTGTTGATCTATCTTCAAATGAATTTTCTGGGGCGATACCTGTGAGTCTTGCCAATTGTACCTTTCTTAATACCCTTAGACTTGATCAGAATCGACTCACTGGTCAAATTCCTCCACAATTTGGTGTTCTCTCACGAATTAAGACATTTTCTGTATCCAACAATCTTTTGACGGGGCCAGTTCCAACCTTTAGCAAGGTTGGAGTTTCGGTAAATTATGCAAATAATCAAGGCCTATGTGGAGGAACTTCATTAGGAGCTTGCCAAGCCAAGTCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGTGGGGTGACTCTTGCAGCATTAGGATTGGGTATTGCAATGTTCTTCTTTGTGCGGCGTGTTTCTTTcaagaagaaggaagaggacCCCGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAAGCAATTAAGGTTTCTATGTTTGagaaatcaatttcaaaaatgaaattgagtGATCTCATGAAGGCCACTAACAACTTCAGTAATACCAATATCATTGGGTCAAGAAGAACAGGAACTGTTTACAGAGCTGTCCTTGATGATGGCACAGCACTTATGATTAAGAGATTACAAGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGAATACACTAGGGACTGTCAAACATCGCAACCTGGTTCCTCTTTTAGGTTTTTGCATGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGCCAACCTCCATGATCAACTCCATCCTGCTGATGGTGTGAGTACCCTTGACTGGACTACGAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATTATCCACCGAAACATAAGCTCTAAGTGTATCTTGTTGGATGCAGATTTTGAGCCCAAAATCTCCGATTTTGGCCTTGCCAGAATGATGAACCCAATTGATACACACTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTAGGTTATGTTGCCCCTGAGTACACAAGAACTTTGGTTGCTACACCTAAGGGGGATATTTACAGCTTTGGGACCGTTCTTCTTGAATTGGTGACCGGTGAAAGACCTACCAATGTGGCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCTCAAGCAACTCGAAACTCCGTGATGCCATTGATGAATCACTAGTTGGCAAGGGTGTTGATAATGAgctttttcaatttctaaaggTTGCATGCAACTGTGTTTTACCAACTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGAGATATTGGTACCTACTGATATTGGTGATACTGATAACTTGGAGGAACTTATTGTAGCTCGAGAAGGAAATTATTGA 1845 0.3984 MLLHSWIFSSHIVIFLLLISCGMTYGTDTDIFCLKSIKDSLEDPYNYLKFSWDFNNKTEGFICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRDIQNCSSLTGLDLSINKLSGTIPVDISTLIPYATSVDLSSNEFSGAIPVSLANCTFLNTLRLDQNRLTGQIPPQFGVLSRIKTFSVSNNLLTGPVPTFSKVGVSVNYANNQGLCGGTSLGACQAKSSKSNMAVIAGAAAGGVTLAALGLGIAMFFFVRRVSFKKKEEDPEGNKWARSLKGTKAIKVSMFEKSISKMKLSDLMKATNNFSNTNIIGSRRTGTVYRAVLDDGTALMIKRLQESQYTEKEFMSEMNTLGTVKHRNLVPLLGFCMAKKERLLVYKNMPNANLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARMMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWITELSSNSKLRDAIDESLVGKGVDNELFQFLKVACNCVLPTPKERPTMFEVYQLLRAIGGRYNFTTEDEILVPTDIGDTDNLEELIVAREGNY 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0698 614 SUPERFAMILY L domain-like 31 192 - -
Ssu2g0698 614 ProSiteProfiles Protein kinase domain profile. 302 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0698 614 PANTHER RECEPTOR-LIKE PROTEIN 55 4 591 - -
Ssu2g0698 614 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Ssu2g0698 614 Gene3D Ribonuclease Inhibitor 28 218 IPR032675 -
Ssu2g0698 614 CDD STKc_IRAK 308 576 - -
Ssu2g0698 614 PANTHER LRR RECEPTOR-LIKE KINASE 4 591 - -
Ssu2g0698 614 Gene3D Phosphorylase Kinase; domain 1 263 375 - -
Ssu2g0698 614 Gene3D Transferase(Phosphotransferase) domain 1 377 591 - -
Ssu2g0698 614 Pfam Protein tyrosine and serine/threonine kinase 305 574 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0698 Ssu-Chr2 38269049 38271289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0698 12 590 Receptor kinase-like Gene Family AT3G28450 46.404 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Ssu2g0698 PK_Tyr_Ser-Thr 6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0698 - - gmx:100305365 1005.74