Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0637 ATGTTCTTCCTAACTGATGCTAGATCAGCTAATGCTTTGATAGTTGATGTTCCAACAGCTGATGCtcgtataattgattattcaaaAGATGACATTGATGCTCCAATAGCTGATTCCTcgactattttattttgtttccctCAGCGGCTAAGTTTTGCCATCCGCAACAAATTTTCTAATGTACAAGCAGAAACATGGTGCCACAGCTCCCAAGAACCCTTATTTGGAgccccaacaacaacaacaacaacaaccgaTGCCTTTTCAGAAGGAAAACTTGACACCTACGTTGAGGCAttgaaaagggagaaaaatggGACTCGCATTCTGGTGTTCATGAGCGTGAGGCCGTTGGCGAAGAAGGAAAAGGAAGCGGAGAAGATAAACAGGGGAGGTCTTACACAATACCAAGCTTATTTCACTAATGAAGTGATGGCATTGCTTCaacaaggaaataaaaacaGAACCACATTACCAATTCGTGCAAATGAAACATCTTCACGGTCCTATGCTATTTTGCAGGTTGTGGTTAAGTACCTAGTTAGAGATGCTGCAatgaatattattaacaaaatgaGCAAGCTCTCACTGATTAATCGTGCAGGGTCAGAGAGAGCACTTGCCACAAATCAAAGAACAGTTAGATCTCTTGAAGGTGCCTATATAAATCGGTCTTTTATAGCACCAAGTAGTTGCATTAATGCTTTTGTAAAAGGAAAGAAGCACATACCATATCGAAGTTCAAAAGTCACTCAACTTCTGAAGGATTCATTAGGAGGAACTTGCAACACTATCATGATTGTAAACATAAGCCCAAGTAACCTTTCATTTGGTGAAACTTAG 843 0.3511 MFFLTDARSANALIVDVPTADARIIDYSKDDIDAPIADSSTILFCFPQRLSFAIRNKFSNVQAETWCHSSQEPLFGAPTTTTTTTDAFSEGKLDTYVEALKREKNGTRILVFMSVRPLAKKEKEAEKINRGGLTQYQAYFTNEVMALLQQGNKNRTTLPIRANETSSRSYAILQVVVKYLVRDAAMNIINKMSKLSLINRAGSERALATNQRTVRSLEGAYINRSFIAPSSCINAFVKGKKHIPYRSSKVTQLLKDSLGGTCNTIMIVNISPSNLSFGET 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0637 280 Pfam Kinesin motor domain 118 280 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g0637 280 SMART kinesin_4 8 280 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g0637 280 Gene3D Kinesin motor domain 96 280 IPR036961 -
Ssu2g0637 280 PANTHER KINESIN-LIKE PROTEIN 128 280 - -
Ssu2g0637 280 PRINTS Kinesin heavy chain signature 243 264 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g0637 280 PRINTS Kinesin heavy chain signature 160 177 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g0637 280 PRINTS Kinesin heavy chain signature 194 212 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g0637 280 ProSiteProfiles Kinesin motor domain profile. 1 280 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu2g0637 280 PANTHER KINESIN-RELATED 128 280 IPR027640 GO:0003777|GO:0007018
Ssu2g0637 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 280 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0637 Ssu-Chr2 36296852 36299235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0637 143 280 Calmodulin-binding Proteins AT5G65930 37.589 1.09e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0637 K10401 - gmx:100798358 244.588