Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0623 ATGCTCCTTTTGCGGCCCACGGTTATTTCAAGGACTTCGTTTGATGCTGAGAAGCTGGAATATTTAAGCAAGACAGGCCTCACTAAGGACTCGAAGATGTATAAATATGTGGTGACATTAATAGGAATCTCCCGCATAGAAACGATTTGGGATAAGTTGGCGAATTTTGCGAGGTTTGGGTTTTCGGAAGACGAGATATTTGGTCTCGTGGGGAGGTCTCCTAATGTTTTGACACTGTCGACTGATAAGGTTCAAAGGAACATGACTTTCATTTTTGGCACAATGAAGCTTGATCCTAAGATGGTTTTAAAGCAGCCTTATCTCTTGTATGCCAATGTGGATACTGTTTTGAAGCCAAGAGTGCTTCTAGCATTGAAGATGCAAGATATGGATTTGAAGTTGCAAATGATGGGACCAATGATGGTAAGGTTACTGAGGATGCCAGAGCAGAGGTTTTTAAGGTTGTTTATCAAGTGCCATCAGGAGGATGTTGCCAATGAATTGATGGAATTCTATAAAAGGACAAAAGAGGTGAAGAGATTAGGAGAGTCATCAAAGAAGTACAGTAAGAGAGGATTCCCTTTCTGA 588 0.4116 MLLLRPTVISRTSFDAEKLEYLSKTGLTKDSKMYKYVVTLIGISRIETIWDKLANFARFGFSEDEIFGLVGRSPNVLTLSTDKVQRNMTFIFGTMKLDPKMVLKQPYLLYANVDTVLKPRVLLALKMQDMDLKLQMMGPMMVRLLRMPEQRFLRLFIKCHQEDVANELMEFYKRTKEVKRLGESSKKYSKRGFPF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0623 195 PANTHER CGI-12 PROTEIN-RELATED 1 195 IPR003690 GO:0003690|GO:0006355
Ssu2g0623 195 Pfam mTERF 13 153 IPR003690 GO:0003690|GO:0006355
Ssu2g0623 195 Gene3D Transcription termination factor 3, mitochondrial 2 182 IPR038538 -
Ssu2g0623 195 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 195 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ssu2g0623 mTERF 1.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0623 K15032 - gmx:100799629 340.117