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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ssu2g0611
ATGGAAAACCAGTTCTTTCTGAATGGTGGGGTGTCACAAACACAACACTCCCTTCACTTTGAACCTTCAAATCCTTCAGTGCCCTCTTGGCAATCACTCTCACCAACCATGGGAATTCAACCAACTGTTCTGAATTGTGCCCCTGAGCAAACCCAAGATTGTTTTTACAACCCCAATTGGGACAAGTCAACAGATCATGGCCTTCACTTTGATTCCTCAGCACTGAGTTCAATGGTCTCATCTCCTGCAGCATCATCCAACCCCAATAATATGTCCAATAAGAATTTCATCATCAGGGAATTGGTGGGGAAATTGGGAGCTATTGGAAGCTCTGATGAGATCCCACAACACTCTCCTCACCCTTTGGTTGTGGCATCTTCTTACATGAACAATGGCACTAACAGCACCAACACTTCATGTTACACCACCCCTTTGAGTTCCCCTCCAAAGGTGAACGTTGTCCACAGTTTGGTGAATGAGAAGTTGGCAAATTTGGGAGGAAAGTCAATGGCTTTGAATTCCAGTGTGGCAGAATTCTCAGCTGATCCTGGCTTTGCTGAGAGGGCTGCAAAGTTATCTTGCTTTGGCAGCAGGAGTTTCAATGGTAGGAGTGGCCAATTGGGGGTGAACAATGCTGAATTGGCTCAGAGATCTGCACCAGTTATGGAACATGGAAAGTTACCTAGAGTCTCAAGTAGTCCATTGCTGGAAACTGTTGGATCTCAAATGGGTGCCCAAGAGAGCAAGAATTCTGCATTTCAGGAGCAGGAAAAAATGGAAGTGGCCAATTCCCAAGAGGAATCTACAATTTCTGAGCAAACCCCAAATGGGGAAACTGGGGTGAAAACTTCCCAAGATATGATGAATTCcaggaaaagaaaaacttctTCCAAAGGAAAAGCCAAAGAAACTTCAAACTCTACTAATCCCACcaagGGTGTTGAAGCTAGTGAGGATTCAAATTCAAAGCGCAGCAAGCCAAATGAGCGTGAGAGAAATGAAAATGGGCCCGTAAAGGTTGAGGAAGAGTCCAAAGCAGTGGAAGAGAAACAGAACAAAAGTAACTCAAAACCTCCTGAGCCTCCAAAAGATTACATTCATGTAAGGGCAAGAAGAGGCCAAGCCACTGACAGCCATAGTCTTGCAGAACGTGTACGGAGGGAGAAAATCAGTGAGAGGATGAAGCTGCTCCAAGATCTTGTACCAGGCTGCAATAAGGTTACTGGCAAGGCACTTATGCtagatgaaattataaattatgttcagtCATTGCAGCGTCAAGTCGAGTTCCTGTCTATGAAGTTGGCTTCTGTTAACACAAGGATGGATCATAGTACTGAGAGTCTTATTTCAAAAGATgtatttcaatcaaataattctTTGGCAACACACCCAAATCCAATATTCCCATTAGATTCCTCAGCACAAGCCTTTTATGGGCACCAGCCTCAGCAAAACCCAGTTATCCATAATAACATACCTAACAGAACGGTGACCCACTGCTCAGTGGACCCATTAGATACTTTGTGCCAAAATCTTGGCATGCAGTTACCTCCCCTAAATGGGTTTAATGAAGGTGGCTCTCAGTATCCATTAACATTCTGTGAGGATGACCTCCACACCATTGTTCAGATGGGGTTTGGCCAAACTCCTAACAGGGAAACACCAATGCAATCCCCGAGTTTCAACGGTAATAAAGCAGAAAAGTCACGCATTATTGACACGTTAatgaaatatcattttcattag
1749
0.4254
MENQFFLNGGVSQTQHSLHFEPSNPSVPSWQSLSPTMGIQPTVLNCAPEQTQDCFYNPNWDKSTDHGLHFDSSALSSMVSSPAASSNPNNMSNKNFIIRELVGKLGAIGSSDEIPQHSPHPLVVASSYMNNGTNSTNTSCYTTPLSSPPKVNVVHSLVNEKLANLGGKSMALNSSVAEFSADPGFAERAAKLSCFGSRSFNGRSGQLGVNNAELAQRSAPVMEHGKLPRVSSSPLLETVGSQMGAQESKNSAFQEQEKMEVANSQEESTISEQTPNGETGVKTSQDMMNSRKRKTSSKGKAKETSNSTNPTKGVEASEDSNSKRSKPNERERNENGPVKVEEESKAVEEKQNKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRMDHSTESLISKDVFQSNNSLATHPNPIFPLDSSAQAFYGHQPQQNPVIHNNIPNRTVTHCSVDPLDTLCQNLGMQLPPLNGFNEGGSQYPLTFCEDDLHTIVQMGFGQTPNRETPMQSPSFNGNKAEKSRIIDTLMKYHFH
582
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ssu2g0611
582
MobiDBLite
consensus disorder prediction
317
365
-
-
Ssu2g0611
582
Pfam
Helix-loop-helix DNA-binding domain
378
425
IPR011598
GO:0046983
Ssu2g0611
582
MobiDBLite
consensus disorder prediction
238
286
-
-
Ssu2g0611
582
MobiDBLite
consensus disorder prediction
238
365
-
-
Ssu2g0611
582
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
372
444
IPR036638
GO:0046983
Ssu2g0611
582
CDD
bHLH_AtBPE_like
364
449
-
-
Ssu2g0611
582
Coils
Coil
421
441
-
-
Ssu2g0611
582
PANTHER
STEROL REGULATORY ELEMENT-BINDING PROTEIN
2
568
IPR024097
GO:0006355
Ssu2g0611
582
MobiDBLite
consensus disorder prediction
301
316
-
-
Ssu2g0611
582
Gene3D
-
371
448
IPR036638
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ssu2g0611
Ssu-Chr2
35078737
35081454
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ssu2g0611
1
529
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT3G07340
41.869
2.36e-101
312
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Ssu2g0611
HLH
4.7e-06
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ssu2g0611
-
-
gmx:100801233
920.998
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Ssu3g1475
3
38537201
38539576
Ssu2g0611
2
35078737
35081454
PCT
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