Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0606 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCctggaggaagaagagaaaGTATGAGCTTGGTAGGCAGCCTGCTAATACTAAGCTATCAAGCAACAAGACTGTTCGGAGGATTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCACTGAGATTGGATACTGGAAATTACTCCTGGGGAAGTGAAGCTGTAACTCGCAAGACTCGTATACTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGAGAACTCAGACCCTTGTCAAAAGTGCTATTGTTCAGGTTGATGCTGCTCCATTCAAACAGTGGTACCTTCAGCACTATGGTGTTGACATTGGTAGGAAAAAGAAGACAGCTGCGAAGAAGGACTCTGCAGAGGAGGGTGATGCTGCTGCTGCAGAAGAAACCAAGAAGAGTAATCATGTGCAGAGAAAATTGGAGAAGCGCCAGAAGGATCGTAAGCTTGATCCCCACATTGAGGAGCAGTTTGGTGGTGGCCGTTTGCTTGCTTGCATTTCCTCTCGACCTGGTCAATGTGGCAGAGCTGACGGCTACATTCTGGAAGGTAAGGAGTTGGAATTTTACATGAAGAAACTCCAAAGGAAGAAGGGAAAGGGCGCTGCTTGA 657 0.4612 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAKKDSAEEGDAAAAEETKKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0606 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Ssu2g0606 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Ssu2g0606 218 Gene3D - 28 213 - -
Ssu2g0606 218 MobiDBLite consensus disorder prediction 129 168 - -
Ssu2g0606 218 TIGRFAM eS8: ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Ssu2g0606 218 MobiDBLite consensus disorder prediction 11 26 - -
Ssu2g0606 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 - -
Ssu2g0606 218 MobiDBLite consensus disorder prediction 1 38 - -
Ssu2g0606 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 IPR001047 GO:0003735|GO:0005840|GO:0006412
Ssu2g0606 218 CDD Ribosomal_S8e_like 5 197 - -
Ssu2g0606 218 Gene3D Ribosomal protein S8e, subdomain 108 176 IPR042563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0606 Ssu-Chr2 34915765 34918353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0606 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.437 6.86e-129 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0606 K02995 - gmx:100794937 399.053