Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0603 ATGAGTTTCCGTCATTCGATGAACGCTGTTCCTATTCTTCTCTTATTCCTCTTTGTTTCGGCATTAGTTTGTGCGAAGAAAACTGGGGATGTAACGGAGTTGCAAATTGGCGTGAAGCATAAACCAGTATCATGTGAAGTTCAGGCACACAAAGGTGATAGAGTCAAAGTACACTATCGGGGAAAACTCACTGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAATCCAATTGAATTTGAGCTTGGTAGTGGTCAAGTGATCAAAGGGTGGGACCAGGGATTATTGGGAATGTGTCTTGGTGAGAAGCGGAAGCTGAAAATACCAGCAAAACTTGGTTATGGAGAGCAGGGTTCCCCACCCACTATTCCAGGTGGTGCAACACTCATATTTGACACTGAGCTTGTGGGTGTGAACGACAAAAGTTTAAgcgaagaaaaacaaaactccgAACTGTAG 462 0.4091 MSFRHSMNAVPILLLFLFVSALVCAKKTGDVTELQIGVKHKPVSCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERNNPIEFELGSGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSEEKQNSEL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0603 153 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 46 137 IPR001179 GO:0003755
Ssu2g0603 153 Gene3D - 20 140 IPR046357 GO:0003755
Ssu2g0603 153 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 140 IPR001179 GO:0003755
Ssu2g0603 153 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 12 149 - -
Ssu2g0603 153 SUPERFAMILY FKBP-like 34 145 - -
Ssu2g0603 153 PANTHER - 12 149 IPR044609 GO:0000413|GO:0003755|GO:0061077
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0603 Ssu-Chr2 34831816 34836031 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0603 53 146 Calmodulin-binding Proteins AT3G25230 33.333 4.46e-06 43.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1471 3 38410192 38414775 Ssu2g0603 2 34831816 34836031 PCT