Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0586 ATGAAGAGAACAGCTAAGAAAACGGACCTTATTCTTGAGAAGTGGCTGGAAGAACATGCAAGAAAGAGAGGTGAGGACAAGAATGGTAAATGTGAAAGCGACTTCATGGATGTGTTGATATCAACGTTCGAAGATCAACAAGAGATTTGTGGCTATAAGCGGGAGATAGTTATCAAAGCAACATCACTGCTCCTCATCCTAACTGGCTCAGGAAGCACAGCCATAACACTAACATGGGCACTTTCCTTGCTCCTAAACCATCCGAAGGCCCTAAAGGCAGCCCAACAAGAATTGGACACCCAcgtaggaaaagaaaaatgggtCCAAGAATCTGACATCAAAGACCTCAATTATCTACAAGCCATCATCAAGGAGACCCTTCGTTTGTACCCACCAGCACCCTTAACCGGAATTAGGGAAGTCATGGAGGATTGTTGTGTGGCAGGGTACCATGTCCCAAAGGGAACACGTTTGCTTATTAACCTATGGAAGTTGCAAAGGGACCCACAAGTATGGCCCAATCCTGATGAGTTTCTGCCCGAGAGGTTCCTCACCACTCATCAAGACATTGACTTTATGAGTCAGGACTTTGAGTTAATCCCATTTAGCTTTGGGAGAAGATCATGCCCAGGCATGACATTTGGGCTCCAAGTGTTGCATTTGACCTTGGCTCGGTTGCTTCAAGGGTTTGATATGTGCACAAAGGATGGTGTTGAAGTTGATATGACTGAAGGGTTAGGAGTGGCCTTGCCTAAGGAACACGAACTTCAAGTTATGCTCCAACCACGTCTTCCATTGGAGCTTTATGAAAGCCTTTGA 819 0.4444 MKRTAKKTDLILEKWLEEHARKRGEDKNGKCESDFMDVLISTFEDQQEICGYKREIVIKATSLLLILTGSGSTAITLTWALSLLLNHPKALKAAQQELDTHVGKEKWVQESDIKDLNYLQAIIKETLRLYPPAPLTGIREVMEDCCVAGYHVPKGTRLLINLWKLQRDPQVWPNPDEFLPERFLTTHQDIDFMSQDFELIPFSFGRRSCPGMTFGLQVLHLTLARLLQGFDMCTKDGVEVDMTEGLGVALPKEHELQVMLQPRLPLELYESL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0586 272 PRINTS E-class P450 group I signature 199 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PRINTS E-class P450 group I signature 209 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PRINTS E-class P450 group I signature 120 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PRINTS E-class P450 group I signature 77 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PRINTS E-class P450 group I signature 161 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 Pfam Cytochrome P450 2 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PANTHER CYTOCHROME P450 82G1 1 270 - -
Ssu2g0586 272 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 202 211 IPR017972 GO:0005506|GO:0016705
Ssu2g0586 272 PRINTS P450 superfamily signature 121 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PRINTS P450 superfamily signature 68 85 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PRINTS P450 superfamily signature 200 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PRINTS P450 superfamily signature 209 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 Gene3D Cytochrome P450 1 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0586 272 PANTHER CYTOCHROME P450 82C3-RELATED 1 270 - -
Ssu2g0586 272 SUPERFAMILY Cytochrome P450 3 263 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0586 Ssu-Chr2 34025091 34028089 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0586 1 269 Cytochrome P450 AT4G31940 52.030 1.41e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0586 K17961 - gmx:100787489 487.648