Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0584 ATGGATCCTGCTTCGTATGTCCCAACTATTGCAGGAATATTCTTTGCTTTGTTAATTGCATACAGTGTGTTTAGGTCCATTAGATCCCCTAATGGATCTAAAACAAGAAAGGGCAACAAAGTGCCCGAACCTCGTGGTGCTTTACCTTTCATAGGTCACCTCCATCTTCTTAGTGCTAGAATACCATATTTCAGGACCTTTTCAGTAATGGCTGAGAAATATGGTCCAATCTTCTCCATCAGGTTGGGTTGCCACCCCACCTTAGTGGTGAATAGCAGGGAAATTGCCAAGGAGTGCCTCACAACAAATGACAAAGTTGTTGCCTCGAGAGCCAACACATCTGGAGGGAGATTCTTAGGTTACAATAATGCAATTTTTGGCCTTGCCCCTTATGGAAAATATTGGcgtgaaattagaaaaatggcCATTCTTGAGATTTTCTCAATTTATAGGCTTGAAAAACTAAAGCACGTGAGAGATACTGAAATATACTCTCTTGTCAAAGGCTTGTACTCATCAATATCATTTGCAAAGAATGTGAAGGGTTCCACTCAAGTGCCTATAAGCAATTTATTGGAGCACATGACCTTCAATATAATTGTGAGGATGATAGCTGGGAAGCGATTTGGATGGGACACCGTTAATCAAGAAGATAACGAGGCATGGAGGCTAAGGAAGGCCATCAAAGATGCCACATATCTATTTGGTGTTTTTGTGGCGGCTGATGCTATTCCATCCCTTAGTTGGTTTGATTTCCAAGGGTATGTGAGTTTCATGAAGAGGACAGCTAAGCAAACTGACCTTATCCTTGAGAAGTGGCTGGAAGaacacataagaaaaaaaggtgAGGAGATAGATGGTGGATGTGAAAGCGACTTCATGGATGTGATGATATCCACGTTCGAAGGGCAAGACGAGATTTGTGGCCATAAGCGGGAGATAGTTATCAAAGCAACATCACTGCTCCTTATCTTAACAGCCTCAGGAAGCACAGCCATAACACTAACATGGGCACTCTCCTTGCTCCTAAACCATCCAAAGACCCTAAAGGCAGCCCAACAAGAATTGGACACCCACGTAGGAAAAGAAAGATGGGTCCAAGAATCTGACATCAAAGACCTCAATTATCTACAAGCCATCATCAAAGAGACCCTTCGTTTGTACCCACCAGCACCCTTAACCGGAATCAGGGAAGTCATGGAGGATTGTTGTGTGGCAGGGTACCATGTCCCAAAGGGAACACGTTTGCTTATTAACCTATGGAAGTTGCAAAGGGACCCACAAGTATGGCCCAATCCTAATGAGTTTCAACCCGAGAGGTTCCTCACCACTCATCAAGACATTGATTTTATGAGTCAGAACTTTGAGTTAATCCCATTTAGCTTTGGGAGAAGGTCATGCCCAGGCATGACATTTGGGCTCCAAGTGTTGCATTTGACCTTGGCTCGGTTGCTTCAAGGGTTTGATATGTGCACAAAGGATGGTGCTAAAGTTGATATGACTGAAGGGTTAGGAGTGGCCTTGCCTAAGGAACACGGACTTCAAGTTATACTCCAACCACGTCTTCCATTGGAGCTTTATGAAAGCCTTTGA 1593 0.4275 MDPASYVPTIAGIFFALLIAYSVFRSIRSPNGSKTRKGNKVPEPRGALPFIGHLHLLSARIPYFRTFSVMAEKYGPIFSIRLGCHPTLVVNSREIAKECLTTNDKVVASRANTSGGRFLGYNNAIFGLAPYGKYWREIRKMAILEIFSIYRLEKLKHVRDTEIYSLVKGLYSSISFAKNVKGSTQVPISNLLEHMTFNIIVRMIAGKRFGWDTVNQEDNEAWRLRKAIKDATYLFGVFVAADAIPSLSWFDFQGYVSFMKRTAKQTDLILEKWLEEHIRKKGEEIDGGCESDFMDVMISTFEGQDEICGHKREIVIKATSLLLILTASGSTAITLTWALSLLLNHPKTLKAAQQELDTHVGKERWVQESDIKDLNYLQAIIKETLRLYPPAPLTGIREVMEDCCVAGYHVPKGTRLLINLWKLQRDPQVWPNPNEFQPERFLTTHQDIDFMSQNFELIPFSFGRRSCPGMTFGLQVLHLTLARLLQGFDMCTKDGAKVDMTEGLGVALPKEHGLQVILQPRLPLELYESL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0584 530 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PANTHER CYTOCHROME P450 82G1 14 528 - -
Ssu2g0584 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Ssu2g0584 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 Pfam Cytochrome P450 42 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 SUPERFAMILY Cytochrome P450 42 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 Gene3D Cytochrome P450 26 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0584 530 PANTHER CYTOCHROME P450 82C3-RELATED 14 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0584 Ssu-Chr2 33958241 33963731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0584 14 527 Cytochrome P450 AT4G31940 49.231 6.63e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0584 K17961 - gmx:100787489 924.465