Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0582 atgTTCCTTATCTTAACGGGCTCAGGAAGCACAGCCATAACACTAACATGGGCACTCTCCTTGCTCCTAAACCATCCAAAGACCCTAAAGGCAGCCCAACAAGAATTGGACACCCACGTAGGAAAAGAAAGATGGGTCCAAGAATCTAACATCAAAGACCTCAATTATCTACAAGCCATCATCAAAGAGACCCTTCGTTTGTACCCACCAGCACCCTTAACCGGAATCAGGGAAGTCATGGAGGATTGTTGTGTGGCAGGGTACCATGTCCCAAAGGGAACACGTTTGCTTATTAACCTATGGAAGTTGCAAAGGGACCCACAAGTATGGCCCAATCCTGATGAGTTTCAACCCGAGAGGTTCCTCACCACTCATCAAGACATTGACTTCATGAGTCAAAACTTTGAGTTAATCCCATTTAGCTTTGGGAGAAGGTCATGCCCCGGCATGACATTTGGGTTGCAAGTGTTGCACTTGACCCTGGCTCGGTTGCTTCAAGGGTTTGATATATGCACAAAGGATGGTGATGAAGTTGATATGACTGAAGGGCTAGGATTGGCCTTGCCTAAGGAACACGGACTTCAAGTTATGCTCCAACCACGTCTTCCATTGGAGCTTTATGAAAGCCTTTGA 633 0.4629 MFLILTGSGSTAITLTWALSLLLNHPKTLKAAQQELDTHVGKERWVQESNIKDLNYLQAIIKETLRLYPPAPLTGIREVMEDCCVAGYHVPKGTRLLINLWKLQRDPQVWPNPDEFQPERFLTTHQDIDFMSQNFELIPFSFGRRSCPGMTFGLQVLHLTLARLLQGFDICTKDGDEVDMTEGLGLALPKEHGLQVMLQPRLPLELYESL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0582 210 Pfam Cytochrome P450 5 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 SUPERFAMILY Cytochrome P450 2 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PRINTS E-class P450 group I signature 15 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PRINTS E-class P450 group I signature 147 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PRINTS E-class P450 group I signature 99 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PRINTS E-class P450 group I signature 137 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PRINTS E-class P450 group I signature 58 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 140 149 IPR017972 GO:0005506|GO:0016705
Ssu2g0582 210 PANTHER CYTOCHROME P450 82G1 1 208 - -
Ssu2g0582 210 PRINTS P450 superfamily signature 6 23 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PRINTS P450 superfamily signature 59 70 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PRINTS P450 superfamily signature 138 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PRINTS P450 superfamily signature 147 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0582 210 PANTHER CYTOCHROME P450 82C3-RELATED 1 208 - -
Ssu2g0582 210 Gene3D Cytochrome P450 1 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0582 Ssu-Chr2 33859783 33863895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0582 3 207 Cytochrome P450 AT4G31940 58.252 1.06e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0582 K17961 - gmx:100791088 394.43