Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0559 ATGCCTAAAACAGGGAAAATGTCCACATTGGTCCATGCCATGAAAGCCTTATTAATTAGAGGGACATCCATTTTGCTAACTGCCTATACAAATTCTGCTGTTGATAATTTGCTCATCAAATTAAAAGCACAGGTATTCATGTCAGCATATTATAATGTCTTCATGTATTATATCATATCATTAAATATGACTACATGTTGCTGTAAAAATACGCATGccttttatttaaagattaaagaTAAAGCTAAGAAATGGAGTGAAAAGAATGTTGTTTTATGTCAAAGAATGCTATGCTTGGTCTCCTAG 306 0.3105 MPKTGKMSTLVHAMKALLIRGTSILLTAYTNSAVDNLLIKLKAQVFMSAYYNVFMYYIISLNMTTCCCKNTHAFYLKIKDKAKKWSEKNVVLCQRMLCLVS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0559 101 Gene3D - 1 98 IPR027417 -
Ssu2g0559 101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 47 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0559 Ssu-Chr2 32423670 32423975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0559 1 44 Core DNA Replication Machinery Family AT1G08840 84.091 9.79e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0559 K10742 - gmx:100799415 79.3369