Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0537 ATGCATGGCTGCAAAAAAGGCCATGGCTACAACTGTCTAGAAGCTTCTGTTCCGCTTTTGGACTCAGTTTCCAATGAAGTTCTGGTAGTGACAGTTGCTTTTGCAAAAATGGTGATGGATGACCATACATTACAGGGCTGTGATGGATCAGTTTTGCTGGATGACACCCGAAACCTCACTGGCGAGAAAACCGCCTTgccaaatttaaattcaatcaaAGGTTTTTCAGTGGTTGATGAAATCAAAGCAGCGGTGGACAAAGCCTACAGAATCAAATTTAATCTGACAATGGTTTACCGATTAATCAGCCCGACTTTCTTGGCTGTGGAGTCTGGACTCTGGACTCTGGACTCTGGAGTGTTGAGTGTGGTAGCAAAATCCTGTGCTAGTCTTTGCAGTGAGCATTACCTTACTCTTTTAAGGTTGGGGAAGGGGAAGATTGTTGAACACTCATGTGCTGAAAGTCTCGAAATTATGGAGTTGCTAGTTGTGgaggagaaggaagaagaagcgAAGGCTATTGGGTACAAAGTGATTGGGGACAGCATTTTCACTGAAAGATTGAAGTTTTGTGAAGTGAATGACAAGGTGAAGGTCTCTTTTGCTAGAAAATCCGAACTCTGTATTCTTTACTGTTATCTTGGCTTTGTCATGTGGGTGGGGTGGTAG 669 0.4111 MHGCKKGHGYNCLEASVPLLDSVSNEVLVVTVAFAKMVMDDHTLQGCDGSVLLDDTRNLTGEKTALPNLNSIKGFSVVDEIKAAVDKAYRIKFNLTMVYRLISPTFLAVESGLWTLDSGVLSVVAKSCASLCSEHYLTLLRLGKGKIVEHSCAESLEIMELLVVEEKEEEAKAIGYKVIGDSIFTERLKFCEVNDKVKVSFARKSELCILYCYLGFVMWVGW 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0537 222 PRINTS Plant peroxidase signature 73 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0537 222 PRINTS Plant peroxidase signature 33 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0537 222 Gene3D - 19 98 - -
Ssu2g0537 222 PANTHER CATIONIC PEROXIDASE 18 91 - -
Ssu2g0537 222 Pfam Peroxidase 35 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0537 222 ProSiteProfiles Plant heme peroxidase family profile. 30 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu2g0537 222 PANTHER PEROXIDASE 72-RELATED 18 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu2g0537 222 SUPERFAMILY Heme-dependent peroxidases 33 89 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0537 Ssu-Chr2 31458348 31478383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0537 36 88 Peroxidase AT5G05340 54.717 6.05e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0537 K00430 - gmx:100811170 88.1965