Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0530 ATGGTGATTAGTGGGACTGTTTACTCTATAGGTGACTGGATTGCACAGCCCGCGGTGATTTCGTCTGCTCCCCTTCCTGGCAATGGAACTGTGACTGGAAGTGGTTCCAATGATAGGACAGGGACTGTGCCTGTTCAAAGATTGTTTGGAATTGAAGAACTGATGGAAGCCACTGATGGGTTTGATGAGAGTTGCATGATTCAGGGGTATGTGTGCAAAGGCTCAATTGAAGGAGAGGACTTTGCAATCAAGAAGATTAAGTGGAATGCCTGTAACGGACTCAAGATCTTACAGAAGAAGCTTGCATTTCTTGCTTCCACTTTTCGCGTAGATGATGCGCGTACAGAGCCTCCCGACGCAGAACCAAACAGGCTCTAA 378 0.4709 MVISGTVYSIGDWIAQPAVISSAPLPGNGTVTGSGSNDRTGTVPVQRLFGIEELMEATDGFDESCMIQGYVCKGSIEGEDFAIKKIKWNACNGLKILQKKLAFLASTFRVDDARTEPPDAEPNRL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0530 125 PANTHER - 47 99 - -
Ssu2g0530 125 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 47 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0530 Ssu-Chr2 31206179 31209908 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0530 36 86 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.000 7.13e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0530 - - lang:109352405 83.1889