Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0512 ATGAAGAAGATCAATCTATTACTCAGAAAATGCAAGAGTTTGTCAAGGCAGCTAGGAAGATCTTCATCATATAGTAGCCTGAGGTCCAAATCCACTAAGGAAGACATATGGGGCGGACATGGCATGCAAGAAGATGAACATTGTGAAACTATATTTGTTGGCAGCACAAGGAAACGGTACGTGATCAGCAAAAAGTATCTGAACCATCCTCTTCTGAATGCACTAATCAACAAGTCAAAGCAAAAAGGAAGTGATGAAAGTTTGTTGGTGGTCAACTGTGAGGTGGTTCTCTTTGATCATCTATTGTGGATGCTAGAAAATGCAGATCCCAAGTTTAGTTCTGAGTCTTTGGAGGAATTGGCTGAACTCTATGTGTTCTAA 381 0.4016 MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDIWGGHGMQEDEHCETIFVGSTRKRYVISKKYLNHPLLNALINKSKQKGSDESLLVVNCEVVLFDHLLWMLENADPKFSSESLEELAELYVF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0512 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 126 IPR003676 GO:0009733
Ssu2g0512 126 PANTHER EXPRESSED PROTEIN 3 126 - -
Ssu2g0512 126 Pfam Auxin responsive protein 31 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0512 Ssu-Chr2 29590988 29591368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0512 50 107 Calmodulin-binding Proteins AT5G20810 36.667 1.24e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0512 - - gmx:100500162 208.764