Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0507 ATGCAGGTGACAACTAAGTGCCGCCACTCGCTAGAACTGCTTGAAGCGTCCACCccgttcgagGACATAATCGAAGTATACATATGTGTGAGGTTCGAGGCGAAGTGGTTgtccttttctttcctcttacaAATTGAGTCTACGGCACTTCGGTTTAGTACTTTATGTGCATACTCTATATGGGCACTATATGTGCGGGATAAGCACTATATGTGCGAGATATGCACTCTACATGGGAGttCTCAACAAAATTCCACAGCAGAACTCTCCGTCTCTCGCTACGTTGATGATACAGTAGTTATTAGTTTCCTTCTTTCAACAGAGATAATTCCTCCGTGCTTTCGCACCATGGAAATGGGCATTGAACTGTCCAAAATAATCTATTGCAATCTAGGTTCAAGCTTGGGAAAGCTTCTTGCTACATCAAATGAGTCATTATGGAGAATAGGATGGGTATATGCAAGGATTTCATGCATTAAACCACTTGTTGTTCCTACAATTGCTAGTGCTCAATTTATTGTGAAAGGTTTCAACCTTTCCCAGTCTAGCACAAGGTGTGTTGATAATAGACGAGAGCGTGCAGTGAGCCTCCGTGAGAGATTCGAAGTTGAAGCAATGCACGACCTTCCTTTTCTGCAGCTCTTGTCAGTGCATTGCACAAACTTCACCTGCTACCCTAAGGCAACTAAGTCCTGGCACATGGAGAGGGAGTGGAAGGCAGATCTAGACAGCAGTGACTCGGATTTCGGTTCAACGGAGGATGATTTGGAGTAG 774 0.4264 MQVTTKCRHSLELLEASTPFEDIIEVYICVRFEAKWLSFSFLLQIESTALRFSTLCAYSIWALYVRDKHYMCEICTLHGSSQQNSTAELSVSRYVDDTVVISFLLSTEIIPPCFRTMEMGIELSKIIYCNLGSSLGKLLATSNESLWRIGWVYARISCIKPLVVPTIASAQFIVKGFNLSQSSTRCVDNRRERAVSLRERFEVEAMHDLPFLQLLSVHCTNFTCYPKATKSWHMEREWKADLDSSDSDFGSTEDDLE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0507 257 Gene3D - 39 215 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0507 Ssu-Chr2 28983317 28997396 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Ssu2g0507 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0507 - K12606 gmx:100780152 87.8113