Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0506 aTGGAACAGTCAAGATTCTACAAACAGCTTCAATGCAATACCATGGAACCTAGAAATGAGGAGTTCCAGCTTGGATCTCAATCAGTAATTCAGGACTGTATGGATGGCATGCATACTATTAGAAGACCATCTGACTATAACCCATCTGATGTTAAACCAGTACTTAATTATTCAATACAGACGGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGGGTGAATCTCAGGAAGCCCATATTTTCAAATGTTAGTGATTCCAATTCCAATTATGCAACTGGTTCTATAGAACTGAAAGGCATCAGTCACGCAGCATCTGAAAGTGGGTCAGACATTTCTATGCTCTCAAAAGTTGAGAAAGTTCCAACAGAGTTTAACAGACAGAGTACATCATTACATGGAGACAGAAGCAATTATGGGTCAATTCGATCAGTACCAAGAACTTCTTTGAATCAGGAGAATAGTCGATTTGTACATGGCTATGGCTCTTCTGTTGGTTCTGACAGCTCATCAATGATGATGAAGTGTCTCTGTAGCTTTGGTGGCAGAATATTACCACGACCAAGTGATGGAAAGCTAAGGTATGTTGGAGGTCAAACTCGTATTCTTCGTCTAAGAAGGGACATATCTTGGCAGGAGCTTATGCAGAAAGCATTGCTAATCTATAATCTGGTTCATGTACTAAAATATCAACTTCCTGGGGAAGATCTTGATGCTTTGGTATCAGTATCGTCTGATGAGGATTTGCAGAATATGATGGAAGAATGTAATCTTCTAGAAGATAGAGAACGCTCACAAAAGCTCAGGTTGTTTTTGTTCTCAATGAGTGATTTGGAAGATGCTCAGTTTGCTCTCAGTAGCATTGGTGATGACTCTGAGGTCCAATATGTTGTTGCTGTGAATGGCATGGACTTCGGATCAAGAAACAACTCAACCCCACTTGGTGTCAGTTTTTCAGCAGAGGATCTACATGAATTGGACAGGCAAACTTCTGAGAGGGAGACTAGTAGAGGTGCTGTAGAATCTATAGGTGTCAGCAATGCTCCCTTGACTAACAAATCTGACCCTTCATTGACTATTCATTCTTCACAACCAGTTCAGCCAAATTCCTCAAATGCTTATGAAATCGATCAACTGTCTTATGGTGACCAAATGATGCAAGTTGGGGAATATAGTCATCAATATTTTGTTCACCATGGCCTTAATTCTACTCAAAACCCTGTGGTTGCAGAGACTCCTATTCCTATGGCTCCTCATCTGCTGAACAATCAACAAGGAGTTCTGAATGAAGATCATCTACCTAGTGGATTACAAATACAAAATTCTCAGTTATATACAGTGCAGATGAAAAAGATAGGCGATAATTCAGTTAAACAAGGGAGTGATCCTGGTAAAGTTTTATCCACGGAAACCCCATCCCCAGCTCCCTCACAGCACTGTGATACTTgcttgaaaagtaattttcctGAAGCATCAGTTGTAGTTACCATGCCTGAGGGGGGGCATCTACCTtcattgccttcaacaaaaagggTTCAGCACAAGGATTATGAAGAGGCCTCTTCTACTTCTAGCAGTGTATTTGTTCCTGCTCATGTTGATTCCGATGCCAATGCAATTGATTTGAGCTGTCTTCATCCTCCTCCACTACCTGAAAGAGTTTACTATTCAGAAAGAACTCCGAGGGAGCAAGTAGAGTTGCTGAATCGTTCCTCAAAGTCAGATGACACGCACGGTTCCCAAATTCATGTGTCAGATTTACTTTCTGATGTCAACCCAGTGGATCCAGTAACAGAATCTGATGACAACTTGCATGATGGTAAAATGTTAAATCCAACTGAGGAATTGGGTATTGCAGCAAAGCCCTTGCTTACAGATGGCCATACCATTGACAATGGGTTttccaaaaatcaaattagCAAACCGTTGGCTGATACGATTAAGTCAAAACTGTCTGAGCACACAGATCCTGAGTTGAAGCTGGTGTTGCAAAGCAATGAAGGAACTAAAGATGTTGAAACTGAAGATTATCGTAAAGATAATCACACCAAGCCCTTGGTTGATGacaccaaaaccaaaaacaaaaccaaagatGGTAAATCAGATCTTCCTCATGTTTTGTCTGGTAAGCGTCTTGATGATCTAGCATCCAATCTTCCAGAGATTGATTGGGGTGAAGCCTCACGGAAGGAATCTAATGATGGGTGTATGGTACAAGAACTACCTGTATCTGTAACTGGGAACATAACCAAAGATGTTTATCAAGATTTCCCCCCAGATATTTCCAAACAAGCTCAAGGTGACATTCTTATTGATATTGATGATCGATTTCCCCGGGAATTGCTTTCTGACATGTTTTCTAAAGCAATACTTGGAGAAGATCCCTCCAGTCTACATCCACTGTCCGGAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAACCTAAAAGATGGtcatattttcataagttagCACAAGAAGGGCTAGATAATGTCTCTCTTATTGATCAGGATCATCTTGGTTTTTCACCCATGATTGGAAAAACAGGAGATGATAGAACTCATCATGTGACGCCGCTAACAACTGATGGAGTTCCTCTACATCATGAAGATTCCCACCTCAATTTCAATGAAGAAAATCAAGAGGACTTACATAGAAGGATTGGAACTGAAACCACTGTTCTGAAGTCCAATTATAATCAATCCCAACTTAAGGACAATGAGAGTATGCAGTTTGATGCTATGATGGAAAATCTAAGAACACAAGAGTCAGAGTTTGAGGATGGCAAATTTGATGTAAAAATAGCAATCTACCTCCACTTGATCCTTCTTTTGGAGATATTGATATTAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGCTGCGAGAACTGGGTTCCGGTACCTTTGGGACTGTGTATCATGGAAAATGGAGAGGAACAGATGTtgctattaaaagaataa 2976 0.3905 MEQSRFYKQLQCNTMEPRNEEFQLGSQSVIQDCMDGMHTIRRPSDYNPSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPIFSNVSDSNSNYATGSIELKGISHAASESGSDISMLSKVEKVPTEFNRQSTSLHGDRSNYGSIRSVPRTSLNQENSRFVHGYGSSVGSDSSSMMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRRDISWQELMQKALLIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNLLEDRERSQKLRLFLFSMSDLEDAQFALSSIGDDSEVQYVVAVNGMDFGSRNNSTPLGVSFSAEDLHELDRQTSERETSRGAVESIGVSNAPLTNKSDPSLTIHSSQPVQPNSSNAYEIDQLSYGDQMMQVGEYSHQYFVHHGLNSTQNPVVAETPIPMAPHLLNNQQGVLNEDHLPSGLQIQNSQLYTVQMKKIGDNSVKQGSDPGKVLSTETPSPAPSQHCDTCLKSNFPEASVVVTMPEGGHLPSLPSTKRVQHKDYEEASSTSSSVFVPAHVDSDANAIDLSCLHPPPLPERVYYSERTPREQVELLNRSSKSDDTHGSQIHVSDLLSDVNPVDPVTESDDNLHDGKMLNPTEELGIAAKPLLTDGHTIDNGFSKNQISKPLADTIKSKLSEHTDPELKLVLQSNEGTKDVETEDYRKDNHTKPLVDDTKTKNKTKDGKSDLPHVLSGKRLDDLASNLPEIDWGEASRKESNDGCMVQELPVSVTGNITKDVYQDFPPDISKQAQGDILIDIDDRFPRELLSDMFSKAILGEDPSSLHPLSGDGVGLSINMENHEPKRWSYFHKLAQEGLDNVSLIDQDHLGFSPMIGKTGDDRTHHVTPLTTDGVPLHHEDSHLNFNEENQEDLHRRIGTETTVLKSNYNQSQLKDNESMQFDAMMENLRTQESEFEDGKFDVKIAIYLHLILLLEILILVLCRSLRMKILKSCENWVPVPLGLCIMENGEEQMLLLKE 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0506 991 MobiDBLite consensus disorder prediction 336 372 - -
Ssu2g0506 991 Gene3D - 192 275 - -
Ssu2g0506 991 CDD PB1_UP2 177 273 - -
Ssu2g0506 991 MobiDBLite consensus disorder prediction 664 705 - -
Ssu2g0506 991 SUPERFAMILY CAD & PB1 domains 189 278 - -
Ssu2g0506 991 SMART PB1_new 188 275 IPR000270 GO:0005515
Ssu2g0506 991 PANTHER SERINE-THREONINE PROTEIN KINASE 93 936 - -
Ssu2g0506 991 MobiDBLite consensus disorder prediction 669 705 - -
Ssu2g0506 991 MobiDBLite consensus disorder prediction 327 372 - -
Ssu2g0506 991 Pfam PB1 domain 190 273 IPR000270 GO:0005515
Ssu2g0506 991 MobiDBLite consensus disorder prediction 455 477 - -
Ssu2g0506 991 PANTHER - 93 936 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0506 Ssu-Chr2 28925642 28939810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0506 759 938 MAP Kinase Kinase Kinase AT1G79570 36.264 1.19e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0506 - - gmx:100817937 1570.44