Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0486 ATGCTCAACTTCGACGCCGCCTCCTCGCCGCCGGCCACCCTCGACGGCGAATCGCGCGGCCTCATGGTTCCCTCTCCCAGCGAGCCGCGCAAGATCGAGATGTACTCGCCCGCCTTCTACGCCGCCTGCACCGTCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTTACTCCTCTTGACCTAGTCAAGTGTAATATGCAGATTGACCCTGCTAAGTACAAGAGCATCTCATCAGGGTTTGGAGTTTTGCTTAAGGAGCAGGGATTCAGGGGCTTTTTCTGTGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCAAGCAAGTACAAGACCTTGATCTACCTTGCTGGTTCGGCATCTGCGGAGGTTATTGCTGATGTTGCGCTTTGCCCCTTCGAGGCTATGAAAGTCCGTGTCCAAAATCAGCCTGGTTTTGCAAGGGGTTTGGGTAATGGGCTCCCAAAATTTGTCAAATCTGAAGGAACCATTAGAGCTGGACCCTATTCCTCTTTCTATTTCCTTACGAAAATGAGGTTAGGCTTGGCCCAATCTCCATTCCACGCCCAGCATATGGGTCTTAAGCAACCCATTCATTCCTCGAAATAG 684 0.5161 MLNFDAASSPPATLDGESRGLMVPSPSEPRKIEMYSPAFYAACTVGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFRGFFCGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAMKVRVQNQPGFARGLGNGLPKFVKSEGTIRAGPYSSFYFLTKMRLGLAQSPFHAQHMGLKQPIHSSK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0486 227 Pfam Mitochondrial carrier protein 40 124 IPR018108 -
Ssu2g0486 227 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 7 189 IPR044677 GO:0005315|GO:1990547
Ssu2g0486 227 MobiDBLite consensus disorder prediction 1 21 - -
Ssu2g0486 227 SUPERFAMILY Mitochondrial carrier 40 201 IPR023395 -
Ssu2g0486 227 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 122 IPR018108 -
Ssu2g0486 227 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 7 189 - -
Ssu2g0486 227 Gene3D Mitochondrial carrier domain 22 210 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0486 Ssu-Chr2 28095072 28095755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0486 19 187 Chloroplast and Mitochondria Gene Families AT5G14040 82.941 1.80e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0486 K15102 - gmx:548006 335.495