Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0474 ATGGCTTTTCTTCTATCCAACCTCAAACCCTCTCTGCTAccccaaatcaaatcaaaactcATTCCCCAAACGCCTTCATCAGCAAAACCCACTGCTCAAAGCCCTTCATTGTACACCTCATCTGCTTCATTTTCCACCCTCCAAAGTTCCACTGCACAGGTTGCCCAGGGGAACACAGCAACGACAGGTGCCAAAGACGAGCATCAGCAGCAAAAGGATGAGTTTTATCTCAATCTTGGCCTTGCTGTGAGGACCCTCCGTGAGGACATGCCCTTGATCTTCATCAAAGACCTCAATTATGACATTTACAGGGATGATATAACATTCAGAGACCCTTTGAACACATTTACCGGCATTGAAAAGTATAAATTGATCTTCTGGGCGTTGAGGTTTCATGGCAAAATTTTGTTCCGTGAGATTGCTCTGGATGTTTATAGGATATGGCAGCCTTCGGAGAATGTGATATTGATCAGGTGGAACCTGAGGGGTGTGCCTCGGGTTCCATGGGAGGCTAAAGGGGAATTTCAGGGTACTTCAAGGTACAAATTGGACCGAAATGGGAAAATTTATGAACACAAAGTTGATAATTTAGCATTCAATTTTCCACAGACCCTCAAACCAGTTTCAGTTTTGGATTTGGTTACTTCCTGCCCTGTAAGTCCAAATCTAACATTTTCATGGGGTCCAGTGGATTCTAACACTTCTTCATGGATAGAGTTTTATCAGGCTGTTAAGGACACATTGGATCAAGAAGAGGGCTTGCTACCTCAAGATTGTCTGGCTACATGTTCATAG 795 0.4277 MAFLLSNLKPSLLPQIKSKLIPQTPSSAKPTAQSPSLYTSSASFSTLQSSTAQVAQGNTATTGAKDEHQQQKDEFYLNLGLAVRTLREDMPLIFIKDLNYDIYRDDITFRDPLNTFTGIEKYKLIFWALRFHGKILFREIALDVYRIWQPSENVILIRWNLRGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQTLKPVSVLDLVTSCPVSPNLTFSWGPVDSNTSSWIEFYQAVKDTLDQEEGLLPQDCLATCS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0474 264 Pfam Uncharacterized conserved protein (DUF2358) 82 192 IPR018790 -
Ssu2g0474 264 PANTHER RIKEN CDNA 2310061I04 GENE 1 264 IPR018790 -
Ssu2g0474 264 PANTHER OSJNBA0070C17.17-LIKE PROTEIN 1 264 - -
Ssu2g0474 264 SUPERFAMILY NTF2-like 99 193 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0474 Ssu-Chr2 27218004 27219469 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0474 - - gmx:100797159 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1484 8 29982508 29983777 Ssu2g0474 2 27218004 27219469 PCT