Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0455 ATGTTATCAAAATTTGGCTTATCTCTCCGTTGCCCTAATAATCCTACACTTGTGAAGTCATCATCTGCACATGTAAGCAATAATGGTCCTTTTAGGGGCATTTTAAATGATGAGCAAGTCGTACAAGGTTGCATACAACCCTCAAGTTTCTTACCACTTATTTTGCCTTCAAAAAAGAATCACAAGTCAAAGTCAGACTTTGGCCCCATGGTTGGAGAAAGCCTTCCTGAACTAATGGCTGAGCCTACAAATGTGAGGTCAATGTCTTTTGTAGGGACACATGAGTATCTTGCACCAGAGATTATTCGTGGTGAAGGACATGGTAATGCAGGGGATTGGTGGACATTTGGGATCTTCTTATATGAGCTTTTACATGGGATAACACCTTTTAAAGGTGCAGGAAATAAAGCCACACTCTTTAATGTTGCAGGGCAGCCCTTAAGATTCCCAGAAACACCCTATGTTAGTAATGTGGCAAGAGACCTTATAAAAGGGTTGTTGGTGAAAGAGCCCTAG 516 0.4128 MLSKFGLSLRCPNNPTLVKSSSAHVSNNGPFRGILNDEQVVQGCIQPSSFLPLILPSKKNHKSKSDFGPMVGESLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGNAGDWWTFGIFLYELLHGITPFKGAGNKATLFNVAGQPLRFPETPYVSNVARDLIKGLLVKEP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0455 171 PANTHER FLIPPASE KINASE 1-RELATED 1 171 - -
Ssu2g0455 171 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 1 171 - -
Ssu2g0455 171 SUPERFAMILY Protein kinase-like (PK-like) 82 171 IPR011009 -
Ssu2g0455 171 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0455 171 Pfam Protein kinase domain 84 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0455 171 Gene3D Transferase(Phosphotransferase) domain 1 84 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0455 Ssu-Chr2 26375663 26376178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0455 1 171 AGC Kinase Gene Family AT1G79250 71.023 7.10e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Ssu2g0455 Pkinase 2.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0455 - - gmx:100802478 295.434