Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0439 ATGGACTTCCTAAGTTCCACCCTCCTGCTGCTCTTCACACTAACCACAATTCTGGTCCTCAAGTATCTCCTTGCACCAAAAAGCACTAACAAGAGCAAATCAAACATAAAGCTCCCACCGGGTCCCACCCCTCTTCCCATAATCGGAAACCTTTTGAAGCTGGGAAACAAGCCCCACCACTCGCTGGCCCAGCTCTCCGACGCTCACGGCCCAATCATGACCTTAAAACTGGGCCAGGTGACCACCATAGTGATATCCTCCGCCGACATGGCCAGAGAGGTGCTCCAAACCCACGACCTCTTGCTCTCGAACAGAACCGTTCCCGATGCTTTGTCTGTCCTCAACCACGACCAATACAGCTTGTCCTTCATGCGCGTCTCGCCACGCTGGCGCGACCTAAGGAAAATCTGCAACAACCAGTTGTTCGCCAACAAGACCCTCGACGCCAGCCAAACCCTCAGGCGCAAGAAGCTGCAGGACCTCTTGAGTGACATCAAGAAGGCAAGTGAAGTTGGTGAGGCAGTGGATATTGGAAGAGCGGCTTTCAAGACAACAATTAATTTGCTATCCAACACTTTTTTCTCGGCGGATTTTGTGCACTCTGCGGCTGAGGCAGGGGAGTACAAGGAGATAGTTGTGAGCATTTTGAAGGAGGTGGGGGCGCCCAACCTCTCTGACTTCTTCCCTGCCTTGAAGATTCTTGACTTGCAAGGCATCAGGAGGCGCTCCATTGTGTCAGTCAAGAAGGTTCTACCCATCTTCCGGCGCTTTGTCGGCGAAAGGTTGAAGACGAGGGAAGGCACCGGTGCGGCCAACAATGATGATGTGCTGGATGCCCTGCTCAACATCTCTCAGGAGAATGGCAAGATAAAGATGGACAAAGATGAGATTGAACACTTGTTGCTGAACATTTTTGTTGCGGGAACCGACACAACTACATATACACTAGAATGGGCAATGGCAGAGCTAATTCACAACCCAAAGATTATGTCAAAAGTTCAGAAGGAACTAGAGGAAGTTGTTGGCAAAGGTAATCCTGTGGAAGAAACAGATGTTGCTAGGCTACCTTACTTGCACACAGTCATAAAAGAGACCTTCCGCGTGCATCCACCAGTTCCATTGTTACTCCCTCGAAAGGCTGAGATAGATGTGGAAATTGGTGGCTACACCATCCCGAAGGATGCACAAATTTTGGTTAATGCATGGGTTATTGGCAGAGATCCAACCAAATGGAACAATCCAAATGTGTTCCTACCAGAGAGGTTCTTGGACTCCGAAATTGACATTAAGGGACATCACTTTGAGCTTATACCATTTGGGTCTGGACGAAGGATATGTCCTGGCTTGCCATTGGCTATTAGAATGTTGCCTTTGATGCTGGGGTCGTTGGTCAATTGCTTTAATTGGAAACTTGAAGAGGGCATAAAGCTAGATGACTTGGACAAGGAAGATGAGTATGGAATTACCTTGGAAAAATCTCAACCTCTTCGAATTGTTCCGGTCAAATTAAGTAATTGA 1518 0.4829 MDFLSSTLLLLFTLTTILVLKYLLAPKSTNKSKSNIKLPPGPTPLPIIGNLLKLGNKPHHSLAQLSDAHGPIMTLKLGQVTTIVISSADMAREVLQTHDLLLSNRTVPDALSVLNHDQYSLSFMRVSPRWRDLRKICNNQLFANKTLDASQTLRRKKLQDLLSDIKKASEVGEAVDIGRAAFKTTINLLSNTFFSADFVHSAAEAGEYKEIVVSILKEVGAPNLSDFFPALKILDLQGIRRRSIVSVKKVLPIFRRFVGERLKTREGTGAANNDDVLDALLNISQENGKIKMDKDEIEHLLLNIFVAGTDTTTYTLEWAMAELIHNPKIMSKVQKELEEVVGKGNPVEETDVARLPYLHTVIKETFRVHPPVPLLLPRKAEIDVEIGGYTIPKDAQILVNAWVIGRDPTKWNNPNVFLPERFLDSEIDIKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLVNCFNWKLEEGIKLDDLDKEDEYGITLEKSQPLRIVPVKLSN 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0439 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 504 - -
Ssu2g0439 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 Gene3D Cytochrome P450 24 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 SUPERFAMILY Cytochrome P450 33 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Ssu2g0439 505 Pfam Cytochrome P450 39 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 504 - -
Ssu2g0439 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0439 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0439 Ssu-Chr2 25891030 25895017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0439 1 502 Cytochrome P450 AT2G45550 44.685 2.05e-160 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0439 - - gmx:100805772 617.076