Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0377 ATGGCCGAAGTCATCAGCGTGCCCCCCGACTCCCTCGACAAATCCCCTTCCTCGTCCGCTCCCCCTCCTGCGCCGCCCCCGCCTCCGCCCTCCGACGACCTCCCGCCGCCGCCCCCGCCGCCGCATTACGCGCCCCGCCGGAGGGACAGGAGGGAAGACAGGGATTTCGATCGCCCTCCCAACCGCCGCGGCGATTACTACGACCGGAACGCGTCGCCGCCACCGCCGCTGCCAAGAGACAGAGACAGGGACAGGGATAGGGACTTCAAGCGCCGCCGCAGCCCGAGCCCTCCCCACCGCGACCGGCGGTATTCTCCGGCGCCGCGGCGGTCTCCTCCGCCGTACAAGCGGTCGCGGAGGGGAAGCCCACGCGGCGGGTATGGACCTGATGATAGCAGACATGGATATGATTATTATGGCGGTTATGATCGGGGAGTGGGTGGAAGAGGTGGTTATACTGACGAGAAGTCCTATGGCAGGTTTGGACCACGTTCTGCAGGGGGGTATCAGAATGGGATTTCTGATGTAGAATCCAATCGTGGTTATGGAGACATGCCAAGTGGTGGTGCCCAAAGAGAGGGGTTGATGTCCTATAAGCAGTTCATTCAGGAGCTTGAGGATGATATACTACCAGCTGAAGCGGAACGTAGGTATCAAGAATACAAATCAGAGTACATCTCAACCCAAAAACGTGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGATTTTTTGCTAGATTTACAGAGTGGAACATTAGAACTAAATCCTGGGTTAAATGCCTCTACATCCAGTAAATCAGGGCAAGCTAGTGAGCCTAATTCAGAGGAGGAAGCAGACACCGGAGGTAAACGAAGAAGGCATGGTAGGGGATCcattaaagaaaatgatttctCAACTGCTCCAAAGGCTCACCCTATCAGTTCTGAACCAAGACGGATACAAGCAGATGTTCAACAGGCCCAGGTCCTTGTTCGCAAGCTTGACACAGAAAAGGGGAttgaagataatattttattcagcAGTGATCACagtaaaaatgaagataaggCTCATGGTGGATCTGTGGGTCCTGTGGTAATTATACGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGTTGAGCTTCTGGATACACTTATTACATATCTTTGGAGGATTCATGGTGTAGATTATTATGGCATGATTGAGACTAATGAAGTTAAGGGCTTTAGGCATGTGAGACTGGAAGGTACAGGACATGAAGAAACAGGTAAATCAGGGTCTGAGTGGGAGAAGAAACTTGACTTATTTTGGCAAGGAAGGCTGCATGGTCAGGATCCCTTGGAATTAATGACTGCTAAGGAGAAAATAGATGCTGCAGCAGTGGAAGTATTGGATCcatatgttagaaaaattagGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGCACAAACATCTGAAGCTCAAACACCCAGAGCTTGTTCTGGAACAGACTTCCAAAGTACGAGAGGAtctctattttcaaaattacatgaaTGATCCAGATGCTCCTGGTGGGACTCCGATCATGCAGCAACCTCAGAAGGACAGGCCTTTAAAGCGAAGATTAGGTCTTGAGGGCCGATTGAGAGATGATCGTGGTAATCGGCGAGACCATGATCGGAGTGACAGAATAAACGGAGATAAGCCTGATAATTCCCCATCCCGTGAAAGGCAATCACTTGAGATGGGAAACCGTGATGAAACAATGTATGATTCATATGCAGGGCCAGGTGTACCTCCATTTGCCTCAGATATACCTCCTCCACCAGTGTTGATGCCTGTCCCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCCCCAGAAGTTGCGATGCAGATGTTAAGGGATCAAGGAGGACCATCATCATATGATGCCTCTGGAAGAAAGATGCGGTCTGGCCCTCATATGGGTGGAGCAGCACCAATAATTGCTGTTCCTCCATCATTCAGACCAGATCCTCGGCGGATGCGAAGTTATCAAGATCTGGATGCCCCAGAGGACGAGGTCACTGTGATAGACTATCGGAGTTTGTAG 2187 0.4856 MAEVISVPPDSLDKSPSSSAPPPAPPPPPPSDDLPPPPPPPHYAPRRRDRREDRDFDRPPNRRGDYYDRNASPPPPLPRDRDRDRDRDFKRRRSPSPPHRDRRYSPAPRRSPPPYKRSRRGSPRGGYGPDDSRHGYDYYGGYDRGVGGRGGYTDEKSYGRFGPRSAGGYQNGISDVESNRGYGDMPSGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQLAKDFLLDLQSGTLELNPGLNASTSSKSGQASEPNSEEEADTGGKRRRHGRGSIKENDFSTAPKAHPISSEPRRIQADVQQAQVLVRKLDTEKGIEDNILFSSDHSKNEDKAHGGSVGPVVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEVKGFRHVRLEGTGHEETGKSGSEWEKKLDLFWQGRLHGQDPLELMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVLEQTSKVREDLYFQNYMNDPDAPGGTPIMQQPQKDRPLKRRLGLEGRLRDDRGNRRDHDRSDRINGDKPDNSPSRERQSLEMGNRDETMYDSYAGPGVPPFASDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGPSSYDASGRKMRSGPHMGGAAPIIAVPPSFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0377 728 MobiDBLite consensus disorder prediction 303 320 - -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 281 341 - -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 281 302 - -
Ssu2g0377 728 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 728 IPR039727 GO:0006397
Ssu2g0377 728 Pfam SERRATE/Ars2, N-terminal domain 199 280 IPR021933 -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 666 713 - -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 564 614 - -
Ssu2g0377 728 ProSitePatterns Zinc finger C2H2 type domain signature. 503 526 IPR013087 -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 75 107 - -
Ssu2g0377 728 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 728 - -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 1 187 - -
Ssu2g0377 728 Pfam Arsenite-resistance protein 2 443 590 IPR007042 -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 15 42 - -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 545 619 - -
Ssu2g0377 728 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0377 Ssu-Chr2 23298747 23305931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0377 59 728 C2H2 Transcription Factor Family AT2G27100 64.338 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0377 - - gmx:100788714 1081.63