Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0374 ATGGGATATGAAACCAGAAAACTCTCAGATGAGTATGAAGTCTCAGAAGTCCTAGGAAGAGGTGGATTTTCTGTTGTCAGAAAAGGCACCAAAAAATCAAGCAGTGAGAGCAAAACCCATGTAGCCATCAAAACCCTGAGAAGGGTAGGCACTGCCTCAAACTCCAACCCTTCTGGACCAAAGGGTGCACAGAAGATGATGGGGTTCCCCACATGGAGACAAGTCTCAGTCTCAGATGCCTTGCTCACCAATGAGATTCTTGTGATGAGGAGAATAGTGGAAAACGTTTCACCACACCCTAATGTGATTGACCTCTACGACGTGTATGAGGACTCAAATGGGGTGCACCTTGTGCTGGAGCTGTGTTCTGGTGGGGAACTGTTTGATCGAATTGTGGCACAAGATAGGTACTCAGAGACTGAAGCCGCGGGTGTGGTTCGCGAGATAGCTTCAGGGTTAGAGGCCATTCATAGAGCCAACATTGTCCACAGGGACTTGAAGCCTGAGAATTGCCTTTTCTTGGATGGGAGGAGGGACTCCCCTCTTAAGATCATGGACTTTGGGTTGAGTTCTGTTGAGGAATTTACCGACCCAGTTGTTGGTTTGTTTGGATCCATCGATTATGTCTCACCAGAGGCTCTTTCTCAAGGGAAGATAACTACCAAGAGTGACATGTGGTCTCTGGGGTGA 690 0.4783 MGYETRKLSDEYEVSEVLGRGGFSVVRKGTKKSSSESKTHVAIKTLRRVGTASNSNPSGPKGAQKMMGFPTWRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQDRYSETEAAGVVREIASGLEAIHRANIVHRDLKPENCLFLDGRRDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0374 229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Ssu2g0374 229 SMART serkin_6 12 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0374 229 ProSitePatterns Protein kinases ATP-binding region signature. 18 44 IPR017441 GO:0005524
Ssu2g0374 229 SUPERFAMILY Protein kinase-like (PK-like) 5 229 IPR011009 -
Ssu2g0374 229 Pfam Protein kinase domain 12 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0374 229 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 229 - -
Ssu2g0374 229 Gene3D Transferase(Phosphotransferase) domain 1 3 229 - -
Ssu2g0374 229 ProSiteProfiles Protein kinase domain profile. 12 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0374 Ssu-Chr2 23220206 23220895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0374 1 229 EF-hand Containing Proteins AT5G23580 35.371 2.97e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Ssu2g0374 Pkinase 2.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0374 K13412 - gmx:732616 416.387