Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0362 ATGGGAAAGATGTTGCAATATTTGACAGTTTTGGATTTCAGCTATAATGAGAATATAACTGAGATACCTGATGTATCTGGTGTCCCAAAGTtagaaaaattatcattaaaacattgtaagaatttaacaaaaatcCATGATTCAGTTGGACTTCTAAAGAAACTTAGAATCTTCGATGCTGCTAATTGCAAGAATCTTATGAATTTTCCGGCCATCAGAATGACTTGTCTTGAACAATTCAATCTCTCCCATTGCTCAAATCTTGAGGATTTCCCAGAAATATTGGGGAAGATGGAAAAAATAACAGAACTTCGTATAACTGGGAGTCCCAtaaaaaattttccattttcaatTCGAAACCTTACTCGGCTTCAAAAATTAGAACTGCAACAATGTGGAATGGTTTCGATACCAAGTAGCATTGTCATGTTGCCAGAACTGGGTTCAATGTGTGTTTCACAATGTAAAGGGTTCCAGATATCTGAAGTGGACAACAGTGAAAAAATGGAATCCAAGCCTTCAAATATGGAATGTCTTATTCTATCGTCCTGCAAAATATCAGATGTCCTCCTTCCAGAATTTCTCACTTTGTTTGCCAATGTGAAGGATTTAAACCTGTTGgggaataattttgtagttcTTAATGCATGCTTCAAAGAATGTCACTTTTTGAGGAACCTTAAGCTAGATGACTGCAGATCTCTAACAAAAGTTAGAGGAATTCCAGTGAAATTAGAAACGTTGTCTATGAAAGGATGTAGGGCCTTAGAATCCTTAGACCTTACAGTGCTTCCTGCATGCACTGAAGTATCTCACTTTCTGAAGGAACTGGTTTTGGATGACTCTGTGTTTCTTAAAGATATTAGAGGGCTTCCACCAAACTTGGATCATTTCTCTGCAAAAAACTGCACATCCTTGACTCCGAGTTGTACACGCATGTTGCTGGATCAGGAATGGGTAGGGACTGGAAGCAAGATGTTTTTTCTGCCAGGAACAAAGATTCCAGAGTGGTTCACATGCTATACAAGGGGAGGGTCTATATCTTTCGAGTTTCGTACCAAATTCCCAGCAATTTCTCTCTGTCTTGTTATTGAAGTGATCACAACAAAAAGACCTCAGAAAGACCAGACTATGGTGCTGTCTACGCCCATTCTCACATCAATCCAACCTCTACCTACTGAAGTTGAAAAAGGCCTAACCTCTCAACCAATACTTTCAGTTGAGAGGCCTTGGGAAGATGTTCAAGGAGAAACTTCAGAGAGGCTTCCAGTGGATGAAGTTCGTTCAACAGTTCAAAATGACCCACCTGTCATTGAAAGATATTCTGACTCAGATGATCCCTTTAATTTGGTTGATGAAAAACTCTCTGTCAGAGATACATCTTTAGTATCTGTTAGAGAGGCCGTTCATGCCTTGGAGCTGTTAATGATTAAGGACTTACCTGAAGTGTCTTCTGATCGTACCATGCAGTCTCAACTTTGTCACTTCTTGAATCTATTGAGTAGAAGTAGCCACCGTAAGGTGACAGTAGATGTGAAGGAGGCTCTTGACAAGTTCCGGAGAAAGGCCTTTGAATCATTCAAAGAATTCCAAGCTACTATTGAgccagtgaacaaactgaagaaTTTTGAGAAGCAGAAGGCCAGAATCCAAAAGGAGACTTCAGCAGCCAAGAATAGGCGGAAGGATCTCAAAAACTCAATAAAGAATGCTTCTTTGGCCATCGAGGCTGACAAAAGTAGGAAGGAGAAGCTAGAGTTAGAAATTGCAAACATGAGGAAACAAGAAGAAGGACTCTTAACCTATGTGAAGAATCGTCGTTCTCTCAAAGAGCAAGTTGGAGCACTATCTAAAGAAGATGATGATCTACTAGCCGCAAACAAGGGAATAGAGGATGAGGGTAAAGATGCTGAAGTAAAGCAGAATATGCTCAAGTCCACCTGGTCTACTGACCTACCTGGCCAGCTTAATAAGATCAAGAATAACATTTTTGGACTTTGA 2001 0.3833 MGKMLQYLTVLDFSYNENITEIPDVSGVPKLEKLSLKHCKNLTKIHDSVGLLKKLRIFDAANCKNLMNFPAIRMTCLEQFNLSHCSNLEDFPEILGKMEKITELRITGSPIKNFPFSIRNLTRLQKLELQQCGMVSIPSSIVMLPELGSMCVSQCKGFQISEVDNSEKMESKPSNMECLILSSCKISDVLLPEFLTLFANVKDLNLLGNNFVVLNACFKECHFLRNLKLDDCRSLTKVRGIPVKLETLSMKGCRALESLDLTVLPACTEVSHFLKELVLDDSVFLKDIRGLPPNLDHFSAKNCTSLTPSCTRMLLDQEWVGTGSKMFFLPGTKIPEWFTCYTRGGSISFEFRTKFPAISLCLVIEVITTKRPQKDQTMVLSTPILTSIQPLPTEVEKGLTSQPILSVERPWEDVQGETSERLPVDEVRSTVQNDPPVIERYSDSDDPFNLVDEKLSVRDTSLVSVREAVHALELLMIKDLPEVSSDRTMQSQLCHFLNLLSRSSHRKVTVDVKEALDKFRRKAFESFKEFQATIEPVNKLKNFEKQKARIQKETSAAKNRRKDLKNSIKNASLAIEADKSRKEKLELEIANMRKQEEGLLTYVKNRRSLKEQVGALSKEDDDLLAANKGIEDEGKDAEVKQNMLKSTWSTDLPGQLNKIKNNIFGL 666
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0362 666 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 261 373 IPR044974 GO:0006952
Ssu2g0362 666 Gene3D Ribonuclease Inhibitor 97 311 IPR032675 -
Ssu2g0362 666 Gene3D Ribonuclease Inhibitor 2 96 IPR032675 -
Ssu2g0362 666 Coils Coil 540 597 - -
Ssu2g0362 666 SUPERFAMILY L domain-like 5 310 - -
Ssu2g0362 666 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 258 IPR044974 GO:0006952
Ssu2g0362 666 PANTHER NB-ARC DOMAIN PROTEIN 12 258 - -
Ssu2g0362 666 PANTHER NB-ARC DOMAIN PROTEIN 261 373 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu2g0362 Ssu-Chr2 22990733 22995872 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0362 5 155 WRKY Transcription Factor Family AT4G12020 35.294 3.79e-15 77.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0362 - - mtr:MTR_8g042660 448.358