Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0360 ATGGAACAGAGGGCAGAAGTTGATGACAAGAGGCAGCAAGAAAACAGAACAGAAAATAGGAGTTTGGAAATAACAGAACCAGCAACTCATGAGCAAGAAATGAGAAAGACAGAAAAAgatgcaaaaagaaaacaagaattgGGGGGACCAGAAATCTTGGAAAAGGAAGCATCCCAAGAGGTAAAAACCCAACAAAAACAAGAAGTAGAGGAGCAAGATCTAGAAGAACGAAAGAAACATGAGGAGGGAGAAAGCAAGGGTGGAAAAGCAAGAAAACAACAAACACTCAACATTTTGGATCAAGAACCTGAAAACAGAAGCAAAGATGAAAATTGGATGGCGGAAAACAAGAACCACTGTGGAGAAGAAGCAACCTTCAGCAAACCTGAACCAAACTCTGTTGACCCACCACCATCAATGGAGACACCTAGGATCCAGATGCCGGGACAAGTTGCTGCAGCACCCCCTCTTTTGAGTTGCATTACATGTGGGAAGGAGCAGAATGTGGGGTTAGGGACAATGTTTCAGGGCCAATTTGGGGCCGTATTGAATTCTTCAGTTCAATTGTTCAAGTCTAGCACAATAATATTGGCTTTATTTCTCTTCGATGTGGGCTTTGTTCAGTTGTTCAAAATGATGGCAGCAAAAGCTACTGCAATAGTTCAAGGCACTTATCCAACACTGCAAATATGGTTGGGTCTTTATCGTTCCCACTGTGGGACCCAGGGGTTTGTGTATCTGACAGTATTGGATTTTGGCTACTGTGAATGGATAACTTGTTTGCCTGATGTATCTGGCctcccaaatttagaaaaattatcttttaaacacTCTgagaatttaattcaaattcatgAGTCAGTTGGATTTCTAGATAAACTTCGAATCTTGGATGCTGTTTGTTGCAAGAAGCTTAGGACTTTTCCACCCATCAGATTGACCAGTCTTGAACAATTCAATCTCTCCCATTGCTCAAATCTTGAGGTTTTCCCAGAAATTTTGGGGAAGATGGAAAATATAACAGAACTTCATATAACTGGGAGTCCCATAAAAGAATTGCCATTTTCAATTCAAAACCTTACTCAGCTTCACAAATTAGGACTGCAACACTGTGGAATGGTTCAGATACCAGGTAGCATCGTCATGTTGGCAGAATTGGGTTCGATGTTTGTTTCACAATGTGAAGGGTTGCAGTTATCTAAACTGGACAAAGGTGAAAAAATGGTGTCCAAGTCTTCAAACATGGAATATCTTATTCTGTCGTACTGCAATATATCAGATGACTTTCTTCCAATAGGTCTCACATTGTTTGCCAATGTGAAAGATTTAAACCTGTCTGGGAATAATTTCACATTTCTTCAtgcatgcatcaaagaatgtcagCTTTTGAGGAACCTTAAGCTGGATGACTGCAGATCTCTAACAAAAGTTAGAGGAATTCCAGTGAAATTAGAAACGTTGTCTATGAAAGGATGTAGGGCCTTAGAATCCTTAGACCTTACAGTGCTTCCTGAATGCACCGAAGGATGTCACTTTCTGAAGGAACTGGTTTTGGATGACTGTGTGCTTCTTCAAGATATTAGAGGGATTCTATCAAACTTGGATCATTTCTCTGCAAAAAACTGCATATCCTTAACTTCCAGCTGTACAAGCATGTTGCTGAATCAGAAATCAATAGAGGCTGGAAACAAGATGTTTTCTTTGCCAGGAAAAATGATTCCGAAGTGGTTTGCGCACTATAGAACTGGAGAGTCAATATCCTTCTGTTTCCGTAACAAATTCCCCGCAATTTCTATCTGTCTTGTTATTGGACCGGTGGATGAACAACCCATTACAGTCAAGTTTAGCCCGAGAGTATTCATCAATAGCAATAAACAGTCCCTTGGAAACCAGAAAGCTTATGAGTTCAGGATAGCAACGgatcatatatttttgtttgatatacAGCTGctaaaatttgaagataatgcAGATGTAGTGCTTTCAGATGATGAGTGGAATCGTGTGGTGGTTTCATATGCAGATCACATTACCAATCACGAAGTTCCAATCAGAATGGCTGCCAAATATAGTGGAATCCATACAACTGAAATGGAGGATGTCAAATTCACCAACCCTCCAGAAGAAATGATAAAGGTAAATTTGGAGCCAAATTCATTGGAGGGGCATCAAAGAGTAAagataacaacAAATAGACCCCAGAAACACCTGACAGTGTTTCTGTCTTCGCCCATTCTAGCAAGTGACCTAGATTCTCGACCAACACCTTCTGTTGAGGGCCCTTGGGAAGATGTTCAAGGAGTAACTTCAGAGTGTCATCCAGTGTATGAAGTTCATCCTACTACAGTTCAAAATGAGCCTCCTATCATTGAAAGATGTGAGGGTGATGACATCTATCTGGAAGCAGTATCCACTAGAGAACTCGAATCTGAAGACTCTTCTTCCAACATTACAGGTTCAGATTCAGAAGATCCCTTCGATCAAATTGATAAAACATTCTGTGTTAGTGGCGAGGAAACCAGATCGTTTGGGGCATGTTCTGGAGATGCATCTCTCACATCTATTAGAGACACCATAGGTGCCTTGGAGCTGTTAATGATTAAGGACTTGTCTGAAGTCTCTTCTGATCCTGCCACGCAGTCTCAACTCAATCACTTAATGGATCTATTGACTAGAAGTAGCCATCGAAAGGTGACTGTGGAGCTGAAGGAGGCTCTTGTCAAGTTCAAGGGAAAGGCCTTGCTACCATCCAAGACTTCCAAGCTTCTGTTGAATCTGTGA 2781 0.393 MEQRAEVDDKRQQENRTENRSLEITEPATHEQEMRKTEKDAKRKQELGGPEILEKEASQEVKTQQKQEVEEQDLEERKKHEEGESKGGKARKQQTLNILDQEPENRSKDENWMAENKNHCGEEATFSKPEPNSVDPPPSMETPRIQMPGQVAAAPPLLSCITCGKEQNVGLGTMFQGQFGAVLNSSVQLFKSSTIILALFLFDVGFVQLFKMMAAKATAIVQGTYPTLQIWLGLYRSHCGTQGFVYLTVLDFGYCEWITCLPDVSGLPNLEKLSFKHSENLIQIHESVGFLDKLRILDAVCCKKLRTFPPIRLTSLEQFNLSHCSNLEVFPEILGKMENITELHITGSPIKELPFSIQNLTQLHKLGLQHCGMVQIPGSIVMLAELGSMFVSQCEGLQLSKLDKGEKMVSKSSNMEYLILSYCNISDDFLPIGLTLFANVKDLNLSGNNFTFLHACIKECQLLRNLKLDDCRSLTKVRGIPVKLETLSMKGCRALESLDLTVLPECTEGCHFLKELVLDDCVLLQDIRGILSNLDHFSAKNCISLTSSCTSMLLNQKSIEAGNKMFSLPGKMIPKWFAHYRTGESISFCFRNKFPAISICLVIGPVDEQPITVKFSPRVFINSNKQSLGNQKAYEFRIATDHIFLFDIQLLKFEDNADVVLSDDEWNRVVVSYADHITNHEVPIRMAAKYSGIHTTEMEDVKFTNPPEEMIKVNLEPNSLEGHQRVKITTNRPQKHLTVFLSSPILASDLDSRPTPSVEGPWEDVQGVTSECHPVYEVHPTTVQNEPPIIERCEGDDIYLEAVSTRELESEDSSSNITGSDSEDPFDQIDKTFCVSGEETRSFGACSGDASLTSIRDTIGALELLMIKDLSEVSSDPATQSQLNHLMDLLTRSSHRKVTVELKEALVKFKGKALLPSKTSKLLLNL 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0360 926 Gene3D Ribonuclease Inhibitor 239 327 IPR032675 -
Ssu2g0360 926 MobiDBLite consensus disorder prediction 1 89 - -
Ssu2g0360 926 SUPERFAMILY L domain-like 243 547 - -
Ssu2g0360 926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 500 618 IPR044974 GO:0006952
Ssu2g0360 926 MobiDBLite consensus disorder prediction 1 111 - -
Ssu2g0360 926 PANTHER NB-ARC DOMAIN PROTEIN 250 497 - -
Ssu2g0360 926 Coils Coil 64 84 - -
Ssu2g0360 926 Gene3D Ribonuclease Inhibitor 328 560 IPR032675 -
Ssu2g0360 926 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 250 497 IPR044974 GO:0006952
Ssu2g0360 926 PANTHER NB-ARC DOMAIN PROTEIN 500 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0360 Ssu-Chr2 22939151 22944893 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0360 229 398 WRKY Transcription Factor Family AT4G12020 34.104 1.26e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0360 - - cam:101495757 737.258