Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0358 ATGAGATTCGTACACTTACATTATGATCCTATGTCTGCAATTGCAACCTTTGCAGCTATAGCTTcaatattgtttatattcagAACCCATTTCAGAAGATTCATCTGCACGAAAGGAAGGCACCATGTGGTTGCTGGCGCTGTCTTAGACCAGTTGTTCAGCTTCCATAGGCTGCACGATTACATGACTGATCTCGCCAGAAAACACAAGACTTGCCGGTTGCTTAGCTTTTACAGGAGTGAGGTTTACACTGCAGACCCTGTGAATGTTGAATATATCCTCAAAACAAACTTAGAAAACTATGGGAAGTGCTGGTACCACTATGAGAGATTGACAGATCTTTTAGGTGATGGCATGTTTACAGTGGACGGTGAGAAATGGCAACATCAGAGAAAGGTAGCAAGCTATGAAATCGGCACCAAAACAGTCAGAGACTTCAGCTTTCAAGTGTTCAAATCCAATGCAGTAAAACTTGCAGGAATTGTTTCAAAAACAGCTATGTCAAATAAAACAGTTGACTTCCAAGAATTGTTTGTGAAATCAACCTTAGACTCGGTATTTAAGATCGTCCTTGGTGTAGACTTGGACACCATTTGTGGAACATATGAAGGAGACACTGAATTCTCCAATGCCTTTGATGAAGCAAGTGCTATTACTTTGTATCGGTATATTGATGTTTTCTGGAAGATCAAGCGTTTCCTCAACATCGGATCAGAAGCAGTACTGAGAAACCGTATTAAAGTGGTGGATGAATTTGTGTATAAACTAAtcagaattaaaacaaaacaagtgcAAAAAAAGGCAGACATGGTGTCAAGATTTCTGGCATTGAAAGAGACAGATACAAAATACCTAAGAGACATTATCCTCAACTTCATGATTGCAGGAAGAGATACAACAGCTGCTACTCTTTCCTGGTTTTTTTACATGCTATGCAAGCATCCTCATGTCCAAGAAAAAATTGCACATGAAGTTGCAGAAGCAGCAAGGTTGAAGAACACTTATAATATTGATGAACTTGCAGATAGCCTAACTAAGGAGAACCCGGAAAAAATGCACTATTTGCATGCAGCTTCAAGTGAAACACTCAGACTTTATCCTGCCGTTCTAGTGGATGGCAAGCTTTGCTTATCAGATGAAACTTTACCTGATGGATTTAGTATTAGGAAAGGTGATGCTATATAA 1185 0.3831 MRFVHLHYDPMSAIATFAAIASILFIFRTHFRRFICTKGRHHVVAGAVLDQLFSFHRLHDYMTDLARKHKTCRLLSFYRSEVYTADPVNVEYILKTNLENYGKCWYHYERLTDLLGDGMFTVDGEKWQHQRKVASYEIGTKTVRDFSFQVFKSNAVKLAGIVSKTAMSNKTVDFQELFVKSTLDSVFKIVLGVDLDTICGTYEGDTEFSNAFDEASAITLYRYIDVFWKIKRFLNIGSEAVLRNRIKVVDEFVYKLIRIKTKQVQKKADMVSRFLALKETDTKYLRDIILNFMIAGRDTTAATLSWFFYMLCKHPHVQEKIAHEVAEAARLKNTYNIDELADSLTKENPEKMHYLHAASSETLRLYPAVLVDGKLCLSDETLPDGFSIRKGDAI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0358 394 Gene3D Cytochrome P450 41 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0358 394 SUPERFAMILY Cytochrome P450 49 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0358 394 PANTHER CYTOCHROME P450 13 394 - -
Ssu2g0358 394 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0358 394 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0358 394 PANTHER - 13 394 - -
Ssu2g0358 394 Pfam Cytochrome P450 55 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0358 394 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu2g0358 394 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0358 Ssu-Chr2 22885528 22888594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0358 40 394 Cytochrome P450 AT2G45510 49.319 3.86e-116 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0358 - - qlo:115970049 507.294