Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0306 ATGTGGGAGATGACTGCAAATACACCACCCAAAAACCTCTCAGCAGTGCATATCAAACCAACCTTAACAGCGTCCTCTCATGGCTATCCTCAGATGCAGCCACAAGCAAAGGCTACAACCACAACAGCTTTGGCAACAACACCCCTGGAGATGCAGCTGTCCAAACAGAGGGGTTCTAGTAAGTCAAGCATATTTATCATTGGCTTAAGTGTGCTGGGGGCAGTAGCTTTGCTATGCTTCAGTGTCTATTGCTTCTGGTTCAGGAAGAGGAATAGAACTAGAAGAGGAAGAGATGATAGAAAGAAGAGGCAACTCGATTGGAATCTAAGATTAAGCATTATCAACGGCATAGCAAAAGGTCTTTTATACCTTCATGAGGATTCTCGACTCAAAGTTATCCATAGAGATCTCAAAGCTAGTAATGTTTTATTAGACGAAGAGATGAATCCGAAAATATCAGATTTTGGATTGGCAAGGGACATTTGA 486 0.4239 MWEMTANTPPKNLSAVHIKPTLTASSHGYPQMQPQAKATTTTALATTPLEMQLSKQRGSSKSSIFIIGLSVLGAVALLCFSVYCFWFRKRNRTRRGRDDRKKRQLDWNLRLSIINGIAKGLLYLHEDSRLKVIHRDLKASNVLLDEEMNPKISDFGLARDI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0306 161 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 50 93 - -
Ssu2g0306 161 Pfam Protein tyrosine and serine/threonine kinase 101 161 IPR001245 GO:0004672|GO:0006468
Ssu2g0306 161 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 98 159 - -
Ssu2g0306 161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Ssu2g0306 161 SUPERFAMILY Protein kinase-like (PK-like) 102 160 IPR011009 -
Ssu2g0306 161 Gene3D Transferase(Phosphotransferase) domain 1 88 161 - -
Ssu2g0306 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0306 161 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 50 93 - -
Ssu2g0306 161 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 98 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0306 Ssu-Chr2 19061944 19064278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0306 98 159 Receptor kinase-like Gene Family AT4G04500 67.742 3.02e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu2g0306 PK_Tyr_Ser-Thr 8.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0306 - - gmx:100813642 123.25