Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0297 ATGGGTACCTCGGATGCAGCCACAAGCCAAGCTAAACAAGGGGGTAATAAGAGGTCGAGAATATTGATCATTGGCTTAAGTGCGCTGGGTTCAGTAGCTTTATTTTGTCTCTTTGTCTATTGCTTCTGGTTCAGGAATAGAACTAGAAGAGGAAGAGATGATGAAAAGAAAATGCAGCTTAATTGGAAACTAAGATTAAGCATTATCAACGGAATAGCAAGAGGTATTCTATACCTTCCTGAGGACTCTAGATTCAGAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACTATGAGATGAATCCCAAAATATCAGATTTTGGATTGGCAAGAGCATTTAAAAAGGATCAGAACCAGGAAAATACAAATCGAGTAATGGGCACTTAG 396 0.3838 MGTSDAATSQAKQGGNKRSRILIIGLSALGSVALFCLFVYCFWFRNRTRRGRDDEKKMQLNWKLRLSIINGIARGILYLPEDSRFRVIHRDLKASNVLLDYEMNPKISDFGLARAFKKDQNQENTNRVMGT 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0297 131 Pfam Protein tyrosine and serine/threonine kinase 56 125 IPR001245 GO:0004672|GO:0006468
Ssu2g0297 131 Gene3D Transferase(Phosphotransferase) domain 1 42 131 - -
Ssu2g0297 131 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 53 131 - -
Ssu2g0297 131 ProSiteProfiles Protein kinase domain profile. 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu2g0297 131 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 53 131 - -
Ssu2g0297 131 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 9 50 - -
Ssu2g0297 131 SUPERFAMILY Protein kinase-like (PK-like) 56 131 IPR011009 -
Ssu2g0297 131 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 50 - -
Ssu2g0297 131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0297 Ssu-Chr2 18609462 18611604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0297 53 131 Receptor kinase-like Gene Family AT4G23230 64.557 1.04e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ssu2g0297 PK_Tyr_Ser-Thr 7.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0297 - - gmx:100795922 139.043