Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu2g0292 | ATGTGCAGCATGCAAGTTCTTGCGTCGCAAATGCCAACCCGAGTGTGCATTTGCACCATACTTTCCCCAGACCAGCCTCAAAAGTTTGCAAATGTTCATAGAATTTTTGGGGCAAGCAATGTCACGAAGCTTCTCAACGACTTGCACCCTCACCAACGTGAAGATGCTGTCAATTCCCTTGCTTATGAAGCCGAGATGAGGCTCCGTGACCCTGTCTATGGTTGTGTAGGAGTCATATCGCTCCTACAGCACCAACTTCGCCAGCTTCAAATGGACCTTTGTTGTGCCAAATCAGAGCTCTCTAGGTACCAAAACTTGAGCATCACCACCAACCATGGCCTCATAGCTTCCGAATCTGCGGCCACGgcctaccaccaccaccaaaacACTAGTGGTGGCGGCTTCGGCCGtgaccaccactaccactaccaccaccagtTCTTTCCAAGGGACCAACAAGTGGTGAGAAGCTTTGATGCAGGGAACAACTATGATGCAAGCCTCTTGGCCATGAACATATCTGCCAGCTTAGGGCAACTCAACCAGCTTCAGCATCAGAGTGCTGCTGGCGGGGGCGATGACCGCCACAGTACTGCCAACCGCTCCTAG | 609 | 0.4745 | MCSMQVLASQMPTRVCICTILSPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLCCAKSELSRYQNLSITTNHGLIASESAATAYHHHQNTSGGGFGRDHHYHYHHQFFPRDQQVVRSFDAGNNYDASLLAMNISASLGQLNQLQHQSAAGGGDDRHSTANRS | 202 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu2g0292 | 202 | ProSiteProfiles | LOB domain profile. | 1 | 100 | IPR004883 | - | |
Ssu2g0292 | 202 | Pfam | Lateral organ boundaries (LOB) domain | 16 | 96 | IPR004883 | - | |
Ssu2g0292 | 202 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 6-LIKE | 16 | 156 | - | - | |
Ssu2g0292 | 202 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 16 | 156 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu2g0292 | Ssu-Chr2 | 17905692 | 17906300 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu2g0292 | 21 | 198 | AS2 family | AT1G65620 | 60.556 | 2.62e-55 | 172 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Ssu2g0292 | LOB | 7.3e-27 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu2g0292 | - | - | gmx:100806890 | 321.242 |