Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0256 ATGGTTGATGTAGCAGGGGCACTGCTTTCTGCGTTCCTTCAAGTTCTCTTTGACAGAATAGCCAACCCAAAGCTTTTGAAGTTTTTTAGTGGAAACAATCTCGATAAGGCTCTAGAGGAGTTAAAGACAAGGTTGCTGTCCGTGAATGCACTCCTTGGAGATGCAGAAGAAAAACAGGTTAACGACACATTTGTGAAAAGCTGGGTTGATAAGCTCAGAGAAGCCGTGTATGATGCAGAAGACGTTTTGGATCAGATTGCTACTAAAGCTTTGCAGTGCAATGTGGAATCACGCGCATCCATAGCTCAGGTAACTGACTCTCATTTAAACGTCTTCAGTGAAAGTATGAAATCTAAACTGGAGGGAATAAATGGGAGATTGAGTTTAATAGTTGAGCATAAACAGCTACTTGGTCTCAAAGAAGGTGGAGATGGAAAAACCTCTTTATCCATGCCAACAACCTCTTTAATAAATGAACGTGAAGTATATGGTAGGGATGGTGACAGAGATTTCATTGTAGATCTGTTTTTATCATTGAACCACGAAAAAGAGGTTTCTGTAATTGCTATTGTTGGGATGGCTGGGACAGGGAAGACAACCCTGTCTCAGATTGTGTACAAAGATCCCATGGTGGAGAGTCATTTTAAAGTTAGATTGTGGGTTTATATATCAGACGGTTCCAATGTGTTTGaagtaactaaaaaaatttatgagtcGCTGACAGGTTTTAACAGTAACATAAGAGACTTGAACACGCTCCAGGTGAAACTAGAATCTGAGTTGAGGGAGAAAAGATTTCTGCTAGTTTTAGATGATTATTGGGCTGAAGGTTTTCTTGACTGGGACCTCCTAAAGAAGCCTTTGGAAAGTGGGGCTAGGGGAAGTTCTATCATAGTTACCACACGAAACAAAAGTGTTGCGTTGGCTATGCATGCTGCTGAAACCTACCTGCTTCCACTTCTATCAGAAGAGGCCTGCCGGCAGTTATTTGCTCACCATGCATTCAGAACCAGATATCCTGAAGCAACCTTAATGGAAATTGGGGAGGAAATAGTAAGAAAATGCAAAGGTCATCCGTTAGCTGTTAAAACACTTGGAAGTCTCTTGGCTTTCAAAACAGAAGCTAAGGATTGGAACAATATACTGCAAAGTAAGATGTGGGATCTTCCGGCTGATAAAAGCAACATATTACCTGCCTTAAGATTGAGCTACCGACATCTTCCTGGACATCTGAAGCGATGTTTTGCTTACTGTTCCATATTCCCTAAAGGTTATACATGCACTAAGAGGAACTTGATCCATTTATGGATGGCTGAGGGTCTTCTACGCCCAtcaaaaaatgaagaaacaaTGGAAGAGGTAGGAGAGGAATATCTCCATGAATTATCGCTGAGGTCAATTCTGCAGTCCAACGATTCATCTTTTACCTTGCATGACCTTATGATCGACTTAGCACAACACAATGGGGGAGAATTTTTTCTCAAGATGGAGCACAATGATCCACAGCAAGTCCCAGAGAAGGTTCGACATTTATCATTCTTGTTGCATGAGCAGGGTGGGGTAGAGAAATTTGAAGCCTTCTTTGTTCTCCCACAATTGAGAACTTTCCTACCATTGAGATTGTCAAACTCTGGGCGATCCTGCTCAATATCTGAAGGATCTCTGAGTATGCTGCTACGCAAACTGAAATGCTTGAGAGTGCTCTCTTTATCTAATTATCCAATCACTGTCTTACCTGATTCAATTGGAGGCTTGATGCATCTAAGGTACCTGAACCTTTCTCACACTTCACTTCAGTATTTACCGGATTTTGTGGGGTCTTTGTATAACTTGCAAACATTGTTGCTGTCAAATTGTCGCAATCTTGAAGCGTTGCCTAGAAATCTGCAGAAGGTAACTAATTTGCTTCATCTTGATATTAGTGGAACCAGCCTGTTAGGGATGCCACCACAGTTTGGTGAATTGAAACATCTCCAAGTGTTGACAACTTTTGTTGCGAGTAGAGAAGGATCAAAGATTAGCGAATTGGGGGAACTTTTGAAGCTTCATGGTGCACTTTCTATCGTGAATTTGCAGAAATTTGTTGTTCCCGAAGATGCATACAAGGCCAAgttgaaggaaaagaaatttctTGATGACTTGGAACTCAAATGGAAAGATGGTATTATCCATGATAGACGGAGGGAAAAACATGTTCTTCATAACCTGCGGCCACacacaaatttgaaaattctcaaaattgaaCACTATGGTGCTGAAGTGTTCCCAGATTGGTTGGGGAGTTCTTCTTTCTCTAATATGGTTTCCGTGCATCTTGTTTCTTGTGAGACTTGCTTATCATTGCCTGCACTTGGTCAATTGCCATATCTTAAAACGCTTCACATAGAAAATATGACAAGTCTAAAAGTTGTGGATGCTGCATTCTTTGGTAATCATACTAGGCCATTTAGTTCCCTTGAAAGTTTGACATTTGTGGACATGTCTAAATGGGAACAGTGGCAGCTAGATGAGGGCAGAGGGTTTCCTTCCCTTAAAGAGTTTTGCATACAGGGATGCCCCAAACTTGATGGTTCACTACCCAGGGTTCCAGCTTTACTGGAACTAGAGCTAACTGGTTGTAGTGCTTTGCGATCTCTGCCTGAGGAAATGATGCAAGGCAATGCTTGTCTAAGGACATTGGTCATCTGCAATTGTCCATGTCTGGAATCCTTTCCTAAAGAGCACATACACTTGACATTGGAGTCACTACAAATCTCTGGGTGTAGGAATTTGGACAGCTTTTGGGATGAACATGCTACCTGGCATTACCGGGCACTGAAGCAGTTGCACATAGAAAGCAGTTGTTGTGACATTCTTACATCCTTTCCATTATCCCTGTTCACAGCACTTCATGATCTCCACGTACTAGACTGTCATAATCTTGAATCTCTTTCACTTTTACCACAGTCGCACCTGGATCTTCAGAACCTCAGTCAAATGGTAATAAAAGGCTGCCCTAATCTAGTGTTGCTACCTGAACAAGGTTTTCCTAACTCCTTGGCTTCTCTCATTATCTGTGACTGTCCACGGCTTGCCCCACTGTGCCGAAGAGATGAAGGACCTTACTGGCACCTTCTTTCTGGACTCCCAAAACTAGTCATTGATGAGGAAATAATAATACCACATGATAATGCAGAACAATGA 3183 0.4097 MVDVAGALLSAFLQVLFDRIANPKLLKFFSGNNLDKALEELKTRLLSVNALLGDAEEKQVNDTFVKSWVDKLREAVYDAEDVLDQIATKALQCNVESRASIAQVTDSHLNVFSESMKSKLEGINGRLSLIVEHKQLLGLKEGGDGKTSLSMPTTSLINEREVYGRDGDRDFIVDLFLSLNHEKEVSVIAIVGMAGTGKTTLSQIVYKDPMVESHFKVRLWVYISDGSNVFEVTKKIYESLTGFNSNIRDLNTLQVKLESELREKRFLLVLDDYWAEGFLDWDLLKKPLESGARGSSIIVTTRNKSVALAMHAAETYLLPLLSEEACRQLFAHHAFRTRYPEATLMEIGEEIVRKCKGHPLAVKTLGSLLAFKTEAKDWNNILQSKMWDLPADKSNILPALRLSYRHLPGHLKRCFAYCSIFPKGYTCTKRNLIHLWMAEGLLRPSKNEETMEEVGEEYLHELSLRSILQSNDSSFTLHDLMIDLAQHNGGEFFLKMEHNDPQQVPEKVRHLSFLLHEQGGVEKFEAFFVLPQLRTFLPLRLSNSGRSCSISEGSLSMLLRKLKCLRVLSLSNYPITVLPDSIGGLMHLRYLNLSHTSLQYLPDFVGSLYNLQTLLLSNCRNLEALPRNLQKVTNLLHLDISGTSLLGMPPQFGELKHLQVLTTFVASREGSKISELGELLKLHGALSIVNLQKFVVPEDAYKAKLKEKKFLDDLELKWKDGIIHDRRREKHVLHNLRPHTNLKILKIEHYGAEVFPDWLGSSSFSNMVSVHLVSCETCLSLPALGQLPYLKTLHIENMTSLKVVDAAFFGNHTRPFSSLESLTFVDMSKWEQWQLDEGRGFPSLKEFCIQGCPKLDGSLPRVPALLELELTGCSALRSLPEEMMQGNACLRTLVICNCPCLESFPKEHIHLTLESLQISGCRNLDSFWDEHATWHYRALKQLHIESSCCDILTSFPLSLFTALHDLHVLDCHNLESLSLLPQSHLDLQNLSQMVIKGCPNLVLLPEQGFPNSLASLIICDCPRLAPLCRRDEGPYWHLLSGLPKLVIDEEIIIPHDNAEQ 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0256 1060 Gene3D - 146 317 IPR027417 -
Ssu2g0256 1060 PANTHER DISEASE RESISTANCE PROTEIN RP 27 933 IPR044974 GO:0006952
Ssu2g0256 1060 Gene3D Ribonuclease Inhibitor 866 1047 IPR032675 -
Ssu2g0256 1060 Gene3D Ribonuclease Inhibitor 538 696 IPR032675 -
Ssu2g0256 1060 Gene3D Ribonuclease Inhibitor 703 865 IPR032675 -
Ssu2g0256 1060 SUPERFAMILY L domain-like 913 1033 - -
Ssu2g0256 1060 CDD RX-CC_like 38 123 IPR038005 -
Ssu2g0256 1060 Pfam Rx N-terminal domain 9 100 IPR041118 -
Ssu2g0256 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 418 IPR027417 -
Ssu2g0256 1060 Gene3D - 320 408 IPR042197 -
Ssu2g0256 1060 Pfam NB-ARC domain 179 404 IPR002182 GO:0043531
Ssu2g0256 1060 PANTHER OS05G0414200 PROTEIN 27 933 - -
Ssu2g0256 1060 SUPERFAMILY L domain-like 543 944 - -
Ssu2g0256 1060 Gene3D - 21 124 - -
Ssu2g0256 1060 Coils Coil 38 58 - -
Ssu2g0256 1060 Gene3D - 409 488 IPR036388 -
Ssu2g0256 1060 PRINTS Disease resistance protein signature 606 622 - -
Ssu2g0256 1060 PRINTS Disease resistance protein signature 187 202 - -
Ssu2g0256 1060 PRINTS Disease resistance protein signature 260 274 - -
Ssu2g0256 1060 PRINTS Disease resistance protein signature 355 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0256 Ssu-Chr2 15039536 15042718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0256 184 662 WRKY Transcription Factor Family AT5G45050 25.245 3.66e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0256 - - cam:101492735 937.176