Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0250 ATGGAAGAGACTGATGTTCCTTTGTCTCTTGACTTGCAgGTGGGTGAATCTAAGTGTATATTTGAAGCTAAAATAATACAGAGAATGAAGCTTCTTGTGCTAAGCACATTGAGGTGGAGAATAGTCTTAAAGATTGCAGCAACAATGGCAATATCTGTGGTGAGGGAGGTCCAAACAGTTCACACTGAGAAAGCAATTTTTGTTCTAATTCAGCTTGTTGAAGAGGGTTTAGATCATATATAG 243 0.3786 MEETDVPLSLDLQVGESKCIFEAKIIQRMKLLVLSTLRWRIVLKIAATMAISVVREVQTVHTEKAIFVLIQLVEEGLDHI 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0250 80 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 41 - -
Ssu2g0250 80 PANTHER CYCLINS 1 41 IPR039361 -
Ssu2g0250 80 SUPERFAMILY Cyclin-like 1 41 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0250 Ssu-Chr2 14608831 14609912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0250 1 55 Core Cell Cycle Gene Families AT4G34160 52.727 2.23e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0250 K18810 - gmx:100803873 90.5077