Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0237 ATGTTTTACTCTGGAATGGCTGGCAACAACCATGGAATGACAATAACAAAGAGTACATTCGACCAAAAAAaggttttcataatttttgaagGCATTAACTATCCGAATTTGTTGAAAGTTGTTGTTGAGTTAACTAATTGGTTTGGTTCTGGGAGCAGAGTAATCATTACAtctcaagataaatatttgcttGAAAGTCATGGAGTTGAAAGAGTATATCAAGTAGAAAGGTCAGATAGAACAACAGTAAGATATGACAACGTTATAGACCGTGCTCAAACTTGTACTTCTAGCGATACATTTGCTTTGGAAGTAATTGATTACAACTCACCTGGAAAAACAATAGAGGAATGCAATTCTGCATTAGATCAATGTGAAAGAATTCCAAATACAGACGTGATGATGCAGAACATGGTTAGAGAAAACAATCGGATAGGATTGTCCAAGgatattttagaagaaaataagGAGGATGGCATGCTAGATGCCCAACCTGCCCCAGATGACAGAAGCAGGATTTGGGATCCAATGGAATTGGAATATCAACTCTgctcttcctcctcttctctaGATGCTTTGTGA 582 0.3299 MFYSGMAGNNHGMTITKSTFDQKKVFIIFEGINYPNLLKVVVELTNWFGSGSRVIITSQDKYLLESHGVERVYQVERSDRTTVRYDNVIDRAQTCTSSDTFALEVIDYNSPGKTIEECNSALDQCERIPNTDVMMQNMVRENNRIGLSKDILEENKEDGMLDAQPAPDDRSRIWDPMELEYQLCSSSSSLDAL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0237 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 134 IPR027417 -
Ssu2g0237 193 PANTHER ARCHAEAL ATPASE 8 133 - -
Ssu2g0237 193 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 133 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0237 Ssu-Chr2 14124171 14124849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0237 4 76 WRKY Transcription Factor Family AT5G45050 24.658 8.00e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0237 - - mtr:MTR_8g039960 106.301