Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0236 ATGTATCCCGGATCTGATGGTGGAGCCTACGTGGTTGGAATATGTGGAGATCCTggaataggaaagaaaaaaatagctCATTTAGTTTATGATTACTTAATTGCCTGCCATGGATTTCATAAGTGTTGCTTTCTTGGTAACGTGGGAGAAAAATTAAGGGAACTTGGATTAGTACATCTCCCACGGATGCTTCTGTCTGAAATGGTTGGCAACAACTATATGGGGTTTGCAAATGTCGAGGAAGGGATGTCAGTAATAAAGCATACTCTCGACCAAAAGAAGGTTCTTACAATTTTGGATGGCATTAACTGTTCGGATTCGTTGAAAGCTGTTGTTGAGCTTACTGATTGCTTTGGTTCTGGAAGCCTAGTCCTCATTACAGCTCAAGATAAAGGTTTGCTTGAAAGTCATGGAATTGAAAGAATACATGAAGTAAAGGGGTTAGATAGGATATCTGGTCATCAGTTGCTTTGTCTAAAAGCTTTCAGTTCCATGAATATGAGTGTCAAATACGCAGACATTATAGGCCGTGCTGAAACTTATGCAGCTGGCAATCCATTGGTTTTGGAAGTAATTGGTTCCTGTTTTCGTGGAAAAACAGTAGCGGAATGCAAGTTTGCGTTAGATCAATATGAAGGAATTCCAATTGCAGACTTCATACAGAACACGAGTGCTCTCAATCACAAAATCCACAACCCTGCTATGGCTTCTGACAGCTGCAGCTCCTCCAACACTGACCCTCCTATGGACCTAACTCAACTCCAAAAGTTAACTCAAGGGGGAAGGACAGCCTTGGAAAGTATAGGTGTATCTGTAGAATCAGTTGAAAGTGCAGCCCTAAGTGAAGGACAACTTTTTGTGCTAATTCTCTTTGGTCTTCTGTTGCTATTTCCTAGTGCAACTCTGGCTATTGTTATGGTTTGTAAGTATTAA 933 0.4009 MYPGSDGGAYVVGICGDPGIGKKKIAHLVYDYLIACHGFHKCCFLGNVGEKLRELGLVHLPRMLLSEMVGNNYMGFANVEEGMSVIKHTLDQKKVLTILDGINCSDSLKAVVELTDCFGSGSLVLITAQDKGLLESHGIERIHEVKGLDRISGHQLLCLKAFSSMNMSVKYADIIGRAETYAAGNPLVLEVIGSCFRGKTVAECKFALDQYEGIPIADFIQNTSALNHKIHNPAMASDSCSSSNTDPPMDLTQLQKLTQGGRTALESIGVSVESVESAALSEGQLFVLILFGLLLLFPSATLAIVMVCKY 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0236 310 Pfam NB-ARC domain 8 209 IPR002182 GO:0043531
Ssu2g0236 310 PRINTS Disease resistance protein signature 89 103 - -
Ssu2g0236 310 PRINTS Disease resistance protein signature 182 196 - -
Ssu2g0236 310 PRINTS Disease resistance protein signature 11 26 - -
Ssu2g0236 310 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 7 217 - -
Ssu2g0236 310 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 217 IPR044974 GO:0006952
Ssu2g0236 310 Gene3D - 2 141 IPR027417 -
Ssu2g0236 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 218 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0236 Ssu-Chr2 14081565 14083813 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0236 12 220 WRKY Transcription Factor Family AT5G45050 28.571 2.52e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0236 - - mtr:MTR_8g039960 202.986