Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0233 ATGGCATTACTATACATTGAAATTCATGAATCGGTTGGATTCCTAGATAAACTTGAAATCTTAAACTTTGAGGGTTGCAGCAAGCTTGAGAGATTTCCGCCAATCAAGTTGACTTCTCTTGAAAGCATCAACCTTTCATATTGTTCAAGTCTTGTGAGTTTTCCTGAAATATTAGGAAAGATGGAAAACATAACAGACATTTCTTTAGAGTACACTGCCATAAGTGAATTGCCATATTCAATTAGAAAACTTGTCCGACTTAGAAGCTTAGAACTGCGCAACTGTGGAATGGTTCAGTTACCAAGTAGCATTGCCACATTGCCAGAACTTGAGATGTTGAGTATTTGGCAATGTGAAGGGTTGCAACCATCACAACAGGACAAAGATGTAGAAACTGAGAGCTTAATGTGTTATCAACTTAGTGCACATTTGGCTACACCAATGTTAAGCTTCAACCTAGGATCAGGTGGGGGCGGGTGA 480 0.3917 MALLYIEIHESVGFLDKLEILNFEGCSKLERFPPIKLTSLESINLSYCSSLVSFPEILGKMENITDISLEYTAISELPYSIRKLVRLRSLELRNCGMVQLPSSIATLPELEMLSIWQCEGLQPSQQDKDVETESLMCYQLSAHLATPMLSFNLGSGGGG 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0233 159 PANTHER LEUCINE-RICH REPEAT-CONTAINING 36 121 - -
Ssu2g0233 159 Gene3D Ribonuclease Inhibitor 3 141 IPR032675 -
Ssu2g0233 159 PANTHER DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS) FAMILY PROTEIN 36 121 - -
Ssu2g0233 159 SUPERFAMILY L domain-like 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0233 Ssu-Chr2 13795387 13799069 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0233 17 122 WRKY Transcription Factor Family AT4G12020 44.444 6.84e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0233 - - gmx:100817027 212.231