Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0231 ATGGATGTTAGAATTCATGAATCGGTTGGATCCCTAGATAAACTTGAAATCATGAACTTTGAGGGTTGCAGCAACCTTTGGACTTTTCCACCGCTCGAATTGACCTCTCTTGAATACCTCAATCTTTCACATTGTTCAAGTCTCAAGAGTTTTCCTGAAATATTGGGCAAAATGGAAAACATAACACATCTTTCTCTGGAGTATACTGCCATAACCAAATTGCCATATTCAATTGGCTATCTTATCCGGCTTCAACGTTTAGAACTGCACAGCTGCGGAATGGTTCAGTTGCCCACTACCATTGCCACATTGCCAGAACTTGAGGAGTTGAGTATTTGGCAATGTGAAGGGTTGCAAGCATCAAAACAAGACAAAGATGTAGAGAAGTTGCCAGCAAGGGGTGGTGGCTGGAGGTCACTGGAGTTGGAAATGGTGGATATAGCGGGCGTCATGGTGGATGGCACCATAAAACATGATCTGGTAGCTGGCAAATGGTGGCAAGCATAA 507 0.4359 MDVRIHESVGSLDKLEIMNFEGCSNLWTFPPLELTSLEYLNLSHCSSLKSFPEILGKMENITHLSLEYTAITKLPYSIGYLIRLQRLELHSCGMVQLPTTIATLPELEELSIWQCEGLQASKQDKDVEKLPARGGGWRSLELEMVDIAGVMVDGTIKHDLVAGKWWQA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0231 168 Pfam Leucine Rich Repeat 36 51 IPR001611 GO:0005515
Ssu2g0231 168 Gene3D Ribonuclease Inhibitor 4 148 IPR032675 -
Ssu2g0231 168 SUPERFAMILY L domain-like 7 115 - -
Ssu2g0231 168 PANTHER LEUCINE-RICH REPEAT-CONTAINING 33 132 - -
Ssu2g0231 168 PANTHER DISEASE RESISTANCE PROTEIN (NBS-LRR CLASS) FAMILY PROTEIN 33 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0231 Ssu-Chr2 13594881 13597899 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0231 5 87 WRKY Transcription Factor Family AT4G12020 38.824 1.16e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0231 - - gmx:100817027 196.438