Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0192 ATGGTttgcggtccgcaaccgcaattgcggttgcaaTGTAAAGGATTTTCGAGTCATCGCAACCATAATTGTGGCCGCATCAGCCgcattttccaacaatttctCGTAATGTCAAGGATCGTGACAAAACTGCGACCACGATtgcaaccacaatttagaaccatgGATGTAGATGTAAACCTAATCATAACAGATTATTGTATGCCAGGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTATATACCGATGCTTGGAAGAGGGAGCAGAAGAATTCTTTCTGAAACCCGTTCAACGGGCAGATGTAAACAAGCTCAAGTCACATTTGATGAAATCAAGAGCTAAGGAAGAGCAAGACCAACCCTTCAATAACAAAAGGAAGGACATGGAAGAAATCCATTCCCCAGATAAAACCAGATTAAAATGTAGCAGTTAA 453 0.3377 MVCGPQPQLRLQCKGFSSHRNHNCGRISRIFQQFLVMSRIVTKLRPRLQPQFRTMDVDVNLIITDYCMPGMTGYDLLRKIKESKSLIYRCLEEGAEEFFLKPVQRADVNKLKSHLMKSRAKEEQDQPFNNKRKDMEEIHSPDKTRLKCSS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0192 150 MobiDBLite consensus disorder prediction 115 150 - -
Ssu2g0192 150 Gene3D - 51 147 - -
Ssu2g0192 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR 45 85 IPR045279 GO:0009736
Ssu2g0192 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR 85 146 IPR045279 GO:0009736
Ssu2g0192 150 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 45 85 - -
Ssu2g0192 150 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 85 146 - -
Ssu2g0192 150 SUPERFAMILY CheY-like 57 123 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0192 Ssu-Chr2 11028198 11030382 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0192 56 128 Response Regulator Gene Family AT2G41310 56.180 6.84e-30 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ssu2g0192 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0192 K14492 - gmx:100787436 173.326