Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0189 ATGACCCTTACTACTGTGGACTCTGCCACTAAGGCCTTAAAATTGCTTGGTCTGGTTGAAGATGAGTTGAGGACTTTTGACGCTCCCCTTGCCTCAGAAATTCATCAGGATGTAGATGTAAACCTGATCATAACAGATTACTGTATGCCAGGAATGACTGGCTATGATCTGCTGAGAAAAATCAAGGAATCTAAATCTCTTAAAGATATACCAGTTGTGATTATGTCCTCAGAGAATGTACCATCAAGGATCAACAGatgCTTGGAAGAGGGAGCAGAAGAATTCTTTCTGAAACCAGTTAAACAGGCAGATGCAAACAAGCTTAAGCCACATTTGATGAAATCAAGAGCTAAGGAAGAGCAAGACCAACCTTTCAATAACAAAAGGAAGGACATGGAAGAAATCCATTCCCCAAATAAAACCAGATTAAAATGTAGCAGTTAA 444 0.3941 MTLTTVDSATKALKLLGLVEDELRTFDAPLASEIHQDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVKQADANKLKPHLMKSRAKEEQDQPFNNKRKDMEEIHSPNKTRLKCSS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0189 147 Pfam Response regulator receiver domain 30 104 IPR001789 GO:0000160
Ssu2g0189 147 Gene3D - 1 143 - -
Ssu2g0189 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 143 IPR045279 GO:0009736
Ssu2g0189 147 ProSiteProfiles Response regulatory domain profile. 1 113 IPR001789 GO:0000160
Ssu2g0189 147 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 143 - -
Ssu2g0189 147 MobiDBLite consensus disorder prediction 109 147 - -
Ssu2g0189 147 SUPERFAMILY CheY-like 27 104 IPR011006 -
Ssu2g0189 147 MobiDBLite consensus disorder prediction 109 140 - -
Ssu2g0189 147 SMART REC_2 1 112 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0189 Ssu-Chr2 10980438 10982033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g0189 3 124 Response Regulator Gene Family AT2G41310 65.574 1.38e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ssu2g0189 Response_reg 6.2e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0189 K14492 - gmx:100787436 271.937